pharmaR / riskassessment

Collaborative Deployment: https://app.pharmar.org/riskassessment/ Risk Assessment Demo App: https://rinpharma.shinyapps.io/riskassessment
https://pharmar.github.io/riskassessment/
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Specify `keep_source = TRUE` argument in `parse()` #678

Closed Jeff-Thompson12 closed 11 months ago

Jeff-Thompson12 commented 11 months ago

The keep_source argument in the parse() function in base R defaults to getOption("keep.source"). This is typically TRUE when ran locally but FALSE when deployed. The source code is necessary for utils::getParseData() to work correctly, so it should be set to TRUE in all cases.

codecov[bot] commented 11 months ago

Codecov Report

Merging #678 (a25cdb4) into dev (08fff46) will increase coverage by 0.04%. Report is 10 commits behind head on dev. The diff coverage is 0.00%.

:exclamation: Current head a25cdb4 differs from pull request most recent head 6d5103d. Consider uploading reports for the commit 6d5103d to get more accurate results

@@            Coverage Diff             @@
##              dev     #678      +/-   ##
==========================================
+ Coverage   72.98%   73.02%   +0.04%     
==========================================
  Files          33       33              
  Lines        4830     4830              
==========================================
+ Hits         3525     3527       +2     
+ Misses       1305     1303       -2     
Files Coverage Δ
R/mod_code_explorer_utils.R 0.00% <0.00%> (ø)

... and 1 file with indirect coverage changes

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