Closes #2487 general issue move deprecated arguments and functions to next phase or remove

[StefanThoma]

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[StefanThoma]

It complains about the link: https://www.fda.gov/media/116737/download But for me it works...

[StefanThoma]

I see, thi

It complains about the link: https://www.fda.gov/media/116737/download But for me it works...

Ah this has been discussed here: https://github.com/pharmaverse/admiral/pull/2494#issuecomment-2311789386

[StefanThoma]

@bundfussr all deprecations went from error to removal. There were no deprecations in stage 1.

[bms63]

@StefanThoma do you have time to check on admiraldev or ask @sadchla-codes where she is at on finishing. I think the updates were pretty minimal.

[bms63]

Many thanks @StefanThoma for getting this completed!