pharmaverse / admiralmetabolic

Metabolic package extension of admiral
https://pharmaverse.github.io/admiralmetabolic/
Apache License 2.0
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Vignettes: Creating an Obesity ADVS #22

Closed manciniedoardo closed 1 month ago

manciniedoardo commented 3 months ago

Base the vignette on the BDS Findings vignette from {admiral} (also uses ADVS – lucky us!) but don't duplicate sections that would be identical. See {admiralpeds} ADVS vignette as an example.​

Suggestion on contest/structure:

Siddhesh2097 commented 2 months ago

Hi @kathrinflunkert , after discussing with the team in the last meeting, I think we can include the following in our vignette.

  1. Adding derive_param_bmi. The reason is that "BMI collected on CRF" / "system calculated BMI" is not considered and we re-calculate BMI in ADVS, so it will be good to have this in vignette as well.

  2. Additional parameters that we have added , WSTCIR, HIPCIR and BMI.

  3. Categorical variables

    • CHGCAT for Change in SYSBP, DIABP, PULSE
    • BASECAT for BMI baseline categories ( Underweight, Overweight, Obese class I, Obese class II ...)
    • AVALCAT for BMI categories , same as above.
  4. The new derive_vars_crit_flag for >= 5%, >= 10%, >= 15% and so on weight reduction

Let me know what you think of the above and if there is anything we missed