Hi, thanks for sharing your code!
I encountered an error while attempting to run the prediction portion of your Colab notebook (without fine-tuning), with default parameters . Here's the error:
CalledProcessError: Command 'python run_prediction.py --targets examples/pmhc_hcv_polg_10mers/targets.tsv --outfile_prefix polg_test2 --model_names model_2_ptm_ft --model_params_files datasets_alphafold_finetune/params/mixed_mhc_pae_run6_af_mhc_params_20640.pkl --ignore_identities' died with <Signals.SIGABRT: 6>.
I also wanted to mention that the default GPU (V100) was unavailable, and Colab connected me to a T4 instead. Could this potentially be related to the error?
Thank you for your time and any insights you can provide.
Hi, thanks for sharing your code! I encountered an error while attempting to run the prediction portion of your Colab notebook (without fine-tuning), with default parameters . Here's the error:
CalledProcessError: Command 'python run_prediction.py --targets examples/pmhc_hcv_polg_10mers/targets.tsv --outfile_prefix polg_test2 --model_names model_2_ptm_ft --model_params_files datasets_alphafold_finetune/params/mixed_mhc_pae_run6_af_mhc_params_20640.pkl --ignore_identities' died with <Signals.SIGABRT: 6>.I also wanted to mention that the default GPU (V100) was unavailable, and Colab connected me to a T4 instead. Could this potentially be related to the error?
Thank you for your time and any insights you can provide.