Open guillemsanchezsanchez1996 opened 4 months ago
Hello Phil,
I have found in some of my sc 10x vdj data sequences that contain a TRDV1 gene segment combined with TRAJ and TRAC genes (see this recent paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10702483/).
Is there a possibility to include the TRDV1 gene among the TRA reference to not get an error 'bad va gene' when preprocessing the 10x vdj data.
Thanks in advance,
Guillem
Hello Phil,
I have found in some of my sc 10x vdj data sequences that contain a TRDV1 gene segment combined with TRAJ and TRAC genes (see this recent paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10702483/).
Is there a possibility to include the TRDV1 gene among the TRA reference to not get an error 'bad va gene' when preprocessing the 10x vdj data.
Thanks in advance,
Guillem