phenomecentre / nPYc-Toolbox

The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.
MIT License
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Feature/bruker biquant #107

Closed duibuqi closed 1 year ago

duibuqi commented 1 year ago

Added test data and a test for Bruker BIQUANT plasma/serum v.2 format

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 100.00% and project coverage change: -0.15 :warning:

Comparison is base (3779062) 76.66% compared to head (339cfd9) 76.52%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #107 +/- ## =========================================== - Coverage 76.66% 76.52% -0.15% =========================================== Files 76 76 Lines 11230 11231 +1 Branches 2253 2253 =========================================== - Hits 8610 8595 -15 - Misses 1902 1923 +21 + Partials 718 713 -5 ``` | Flag | Coverage Δ | | |---|---|---| | unittests | `76.52% <100.00%> (-0.15%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=phenomecentre#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://app.codecov.io/gh/phenomecentre/nPYc-Toolbox/pull/107?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=phenomecentre) | Coverage Δ | | |---|---|---| | [nPYc/utilities/\_readBrukerXML.py](https://app.codecov.io/gh/phenomecentre/nPYc-Toolbox/pull/107?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=phenomecentre#diff-blBZYy91dGlsaXRpZXMvX3JlYWRCcnVrZXJYTUwucHk=) | `100.00% <100.00%> (+8.88%)` | :arrow_up: | | [nPYc/utilities/generic.py](https://app.codecov.io/gh/phenomecentre/nPYc-Toolbox/pull/107?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=phenomecentre#diff-blBZYy91dGlsaXRpZXMvZ2VuZXJpYy5weQ==) | `100.00% <100.00%> (ø)` | | ... and [3 files with indirect coverage changes](https://app.codecov.io/gh/phenomecentre/nPYc-Toolbox/pull/107/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=phenomecentre)

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