We are attempting to modify the phenopacket format to allow us to describe environments using specific attributes (temp, humidity, pressure, light, etc...) and have a mock up of an environment that can be found here:
However, when attempting to validate the test packet, we run into this error:
Invalid phenopacket found in ~/git/EnviroPackets/hadalpelagic_zone.json
'environment' is not one of ['disease', 'organism', 'patient', 'variant', 'genotype', 'paper']
It's pretty clear that an environment is not one of those options, so my assumption is that we need to add a "type" to the possible options? I do not see these classes defined in the schema.
We are attempting to modify the phenopacket format to allow us to describe environments using specific attributes (temp, humidity, pressure, light, etc...) and have a mock up of an environment that can be found here:
https://github.com/phenoscape/EnviroPackets/blob/master/hadalpelagic_zone.json
However, when attempting to validate the test packet, we run into this error:
It's pretty clear that an environment is not one of those options, so my assumption is that we need to add a "type" to the possible options? I do not see these classes defined in the schema.
@cmungall