Open mylesaxton opened 4 years ago
@mylesaxton Thanks for these suggestions and sorry for the late feedback. This year we have been working on extensions for cancer and common disease and treatment, and we are now anticipating finalizing the v2 phenopackets early next year. We are also in the process of creating an API for the creation of phenopackets and we would love to move forward.
Answers
Hi Chris,
Are there any plans to update PXF at FAIRsharing? https://fairsharing.org/10.25504/FAIRsharing.9xsgcr For example, the schema is not listed but rather found at https://github.com/phenopackets/phenopacket-schema
2) What databases have implemented the exchange format? It is difficult for journals to endorse a database-database exchange format without an implementing database to refer from the publication to the phenotypic records.
3) What licenses are associated with PXF records? How would licensing affect the export of full phenotypic records for publication?
4) Is it possible to export PXF records from a hosting database into JSON format in order to replicate the record in a published work?
With all best wishes,
Myles
Myles Axton PhD -- Editor-in-Chief
Genetics & Genomics Next
https://onlinelibrary.wiley.com/journal/26416573
maxton@wiley.com
https://orcid.org/0000-0002-8042-4131
Wiley, Inc., Hoboken, NJ 07030