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phenopackets / phenopacket-tools

An app and library for building, conversion, and validation of GA4GH Phenopackets.
http://phenopackets.org/phenopacket-tools/stable/
GNU General Public License v3.0
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moving classes to new constants package #49

Closed pnrobinson closed 2 years ago

pnrobinson commented 2 years ago

Let's use this branch to add various predefined constants. I will write a script to make Java code from HPO terms that we will want. We should also add

  1. Units
  2. major tissues (UBERON)
  3. Evidence Codes (ECO)
  4. ?? Anything else ??
julesjacobsen commented 2 years ago

HPO?! We already have Severity, Onset, Laterality. It's hard to see where to stop with these if we take this course.

julesjacobsen commented 2 years ago

@pnrobinson sorry, I committed a whole bunch of changes to this branch which I want to put onto development too so as not to get out of sync. The only major change I made specifically relevant to this branch is moving the constants package up a level into org.phenopackets.phenotools.builder.constants to make it easier to find.