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phenopolis / phenopolis_genomics_browser

Python API and React frontend for the Phenopolis Genomics Browser
https://dev-live.phenopolis.org
MIT License
31 stars 2 forks source link

implement search by rsid #298

Open pontikos opened 3 years ago

pontikos commented 3 years ago

Allow for search by rsid ( rs6594027 ), this will search column ID in variant table

alanwilter commented 3 years ago

I have problem with that since I don't have RSID in the new schema. See the length discussion in #329 (more specifically the table here) and table Old x New schema for GENE web page (the yellow row about ID/RSID). The ID col from public.variants, which is RSID, has nothing to do with phenopolis.variant ID col, which is mere index.

The question is: where's RSID in the new schema?