phenopolis / phenopolis_genomics_browser

Python API and React frontend for the Phenopolis Genomics Browser
https://dev-live.phenopolis.org
MIT License
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Compound het filter #313

Open pontikos opened 3 years ago

pontikos commented 3 years ago

Add a compound het filter to gene page.

Once implemented can also be added to individual page and "compound het" tab can then be removed.

A compound het filter will only keep variants if there at least one other variant in an individual in the same gene.

On the gene page, this can probably be achieved by filtering for each individual and only keeping variants if individual has a count of 2 or more.

On the individual page, the invidual is fixed and this needs to be done per gene.

Perhaps this may be easier to implement in backend api than frontend?