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phenopolis
/
phenopolis_genomics_browser
Python API and React frontend for the Phenopolis Genomics Browser
https://dev-live.phenopolis.org
MIT License
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Simplifying tests and coverage
#235
alanwilter
closed
3 years ago
2
More coverage
#234
alanwilter
closed
3 years ago
0
Variant classification
#233
priesgo
closed
3 years ago
6
Added extra fields to individual_variant
#232
dvarrazzo
closed
3 years ago
2
Individual variant
#231
dvarrazzo
closed
3 years ago
1
Rollback variant changes
#230
priesgo
closed
3 years ago
3
Replace PySAM with cyvcf2
#229
alanwilter
closed
3 years ago
6
Fix stats performance
#228
priesgo
closed
3 years ago
0
Fix stats performance
#227
priesgo
closed
3 years ago
0
add mising imports
#226
priesgo
closed
3 years ago
0
db patch for user registration + callback URL
#225
priesgo
closed
3 years ago
0
Homogenise response structure across the whole API
#224
priesgo
closed
3 years ago
1
214 improve variants
#223
priesgo
closed
3 years ago
1
Enrich the variant preview
#222
priesgo
opened
3 years ago
6
Import clinvar data into new schema
#221
priesgo
opened
3 years ago
1
changing the reference in hom_variants and het_variants to individual…
#220
priesgo
closed
3 years ago
0
216 user specific stats 2
#219
priesgo
closed
3 years ago
0
23 user registration
#218
priesgo
closed
3 years ago
6
216 user specific stats
#217
priesgo
closed
4 years ago
2
Add statistics endpoint with logged user specific data
#216
priesgo
closed
3 years ago
1
adds variant autocomplete by genomic region
#215
priesgo
closed
4 years ago
0
improve performance of /variants endpoint
#214
priesgo
closed
3 years ago
0
add caching on browser of entities querying
#213
priesgo
closed
4 years ago
0
cache hover over queries
#212
priesgo
closed
4 years ago
0
add patch for some old changes to the database
#211
priesgo
closed
4 years ago
1
257 error user create
#210
priesgo
closed
4 years ago
0
Fixed audit table for users after `enabled` field was added.
#209
dvarrazzo
closed
4 years ago
0
manage transactions right
#208
priesgo
closed
4 years ago
8
205/complete users tests
#207
priesgo
closed
4 years ago
0
205/complete users tests
#206
priesgo
closed
4 years ago
0
Complete tests for users POST endpoints
#205
priesgo
closed
4 years ago
0
ensures that user creation sets enabled flag by default
#204
priesgo
closed
4 years ago
0
implement hgvsc / hgvsp search
#203
pontikos
closed
4 years ago
0
add self-signed https between LB + Web servers within the VPC
#202
IsmailM
closed
4 years ago
0
add self-signed https between LB + Web servers within the VPC
#201
IsmailM
closed
4 years ago
0
correct user config seeded in the testing database
#200
priesgo
closed
4 years ago
0
100 improve hgvs search
#199
priesgo
closed
4 years ago
2
Add an EB ignore
#198
IsmailM
closed
4 years ago
0
102 search order
#197
priesgo
closed
4 years ago
0
increase individuals page size to 100000
#196
priesgo
closed
4 years ago
0
19 migrate individuals sqlalchemy
#195
priesgo
closed
4 years ago
4
Remove logzero
#194
alanwilter
closed
4 years ago
0
Error in local deployed Login API
#193
YuanTian1991
closed
3 years ago
3
189 import transcripts
#192
priesgo
closed
4 years ago
8
WIP: add the script to read genes.csv to phenopolis_api
#191
priesgo
closed
4 years ago
0
181 list individuals
#190
priesgo
closed
4 years ago
0
Fetch reference for transcripts from biomart
#189
priesgo
closed
4 years ago
0
Endpoint to enable/disable users
#188
priesgo
closed
4 years ago
5
add endpoint to delete user_individuals
#187
priesgo
closed
4 years ago
2
Added script to import Kaviar annotations
#186
dvarrazzo
closed
4 years ago
8
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