Develop short course curriculum and lessons

phenoscape / scate

Project repo for Enabling Machine-actionable Semantics for Comparative Analysis of Trait Evolution (SCATE)

http://scate.phenoscape.org

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Develop short course curriculum and lessons #2

Open hlapp opened 6 years ago

hlapp commented 6 years ago

Short-course on requisite knowledge representation and computational knowledge inference technologies. Teach the course at the Evolution Meetings from 2018 to 2020

Contract assessment w/ Data Carpentry.

Syllabus (2 days)

What is an ontology?
Phenotype ontologies (Phenoscape)
Logic/reasoning in Protege
Curating data in Phenoscape (Phenex/Phenote)
OntoTrace
Semantic similarity
End with project/idea talks

Travel grants

Elixir?

tjv commented 5 years ago

Include demonstration of comparative analysis w/ ontologies in R (Sergei leading?)

tjv commented 5 years ago

Present in reverse order, so application first, working back down to phenotype ontologies.

tjv commented 5 years ago

Given the time, we will provide canned data.