phenotips clinical-text-analysis-extension issues

phenotips / clinical-text-analysis-extension

An extension for Phenotips to extract HPO terms from free text.

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issues

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dependency issue

#27 Masber opened 5 years ago
3
Checkstyle error while building phenotips-components

#26 Masber closed 5 years ago
1
CORE-39: Improve UI of text-mining suggestions

#25 buske closed 5 years ago
0
PT-3811: Remove ctakes from the text mining options, and disable text mining by default

#24 a-gvo closed 6 years ago
1
PT-3522: Translate SUGGESTIONS FROM CLINICAL NOTES

#23 veronikaslc closed 6 years ago
0
Fix the memory issue in the annotation service

#22 SimonLi5601 closed 6 years ago
1
Memory issue

#21 SimonLi5601 opened 6 years ago
2
PT-3386 / PT-3417: Add administration section for configuring the text-mining service

#20 marta- closed 7 years ago
0
PT-3387: Suggestions from clinical notes are sometimes misaligned

#19 marta- closed 7 years ago
0
PT-2495: Service for annotating freeform text with HPO terms using SciGraph

#18 sdumitriu opened 7 years ago
0
Add a SciGraph based implementation

#17 sdumitriu opened 7 years ago
0
PT-3358: Service for annotating freeform text with HPO terms using CTakes

#16 sdumitriu closed 7 years ago
0
Add a CTAKES implementation

#15 sdumitriu opened 7 years ago
0
Add ctakes as an annotation service

#14 josecv closed 7 years ago
1
Add scigraph support to the clinical-text-analysis-extension

#13 josecv closed 7 years ago
2
ontology to vocabulary name change

#12 DeanWay closed 9 years ago
0
When clicking on the highlighted words in the source text, the user should have the ability to see and select other terms that match them

#11 marta- opened 10 years ago
0
When the user selects a piece of the entered text, (s)he should be presented with a 'search' option allowing to find terms matching that text

#10 marta- opened 10 years ago
1
Better UI design and integration

#9 marta- opened 10 years ago
0
Highlight the words corresponding to each identified term in the original text

#8 marta- opened 10 years ago
0
Attach Y/N/NA pickers to the identified HPO terms, to make them selectable

#7 marta- opened 10 years ago
0
The text analysis ui should be displayed only if the phenotype UIX is enabled

#6 marta- opened 10 years ago
0
Create the basic ui and functionality

#5 marta- closed 9 years ago
1
Create a basic UIX that communicates with the text analysis component

#4 marta- opened 10 years ago
0
Add a Bio-LarK based implementation

#3 sdumitriu opened 10 years ago
0
Design the API and add the data structures and component roles needed

#2 sdumitriu opened 10 years ago
0
Create the base project structure

#1 sdumitriu closed 10 years ago
0