Manually entered variants don't show up in the matching results

phenotips / patient-network

Patient matching extension for PhenoTips

GNU Affero General Public License v3.0

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Closed veronikaslc closed 9 years ago

veronikaslc commented 9 years ago

After gene sections will be unified by PR phenotips/phenotips#1742 the variant list of getTopVariants() should also include gene names from candidate variants that have been entered, with pathogenic status 3-5 (VUS or higher). Changes will have to be made to: https://github.com/phenotips/patient-network/blob/master/similarity-data-impl/src/main/java/org/phenotips/data/similarity/internal/DefaultPatientGenotype.java#L98-L122

buske commented 9 years ago