Closed Xavier919 closed 1 year ago
Hi, thanks for the great tool !
Im having issues with the docker config, any idea what could be causing the following error:
alfatclust -i /data/mydb.fasta -o /data
Estimated similarity range = [0.95, 0.75] Estimated similarity step size = 0.025 Default DNA k-mer size = 17 Default protein k-mer size = 9 Default DNA sketch size = 2000 Default protein sketch size = 2000 Min. estimated similarity considered = 0.55 Disable reverse complement for DNA = False No. of threads = 12
Validating input sequence file '/data/mydb.fasta'... Pre-clustering sequences into subsets...
Process aborted due to error occurred: [Errno 2] No such file or directory: '/tmp/tmpgx9bgg6e/seq_preclusters.tsv'
Thanks!
Hi, thanks for the great tool !
Im having issues with the docker config, any idea what could be causing the following error:
alfatclust -i /data/mydb.fasta -o /data
Estimated similarity range = [0.95, 0.75] Estimated similarity step size = 0.025 Default DNA k-mer size = 17 Default protein k-mer size = 9 Default DNA sketch size = 2000 Default protein sketch size = 2000 Min. estimated similarity considered = 0.55 Disable reverse complement for DNA = False No. of threads = 12
Validating input sequence file '/data/mydb.fasta'... Pre-clustering sequences into subsets...
Process aborted due to error occurred: [Errno 2] No such file or directory: '/tmp/tmpgx9bgg6e/seq_preclusters.tsv'
Thanks!