Hi,
I have been using your script on my data but an error occurred using flexible_genome_sweeps:
Waiting at most 5 seconds for missing files.
Error in job run_mmseqs while creating output files proc/acidovorax/clusters/DB.0, proc/acidovorax/clusters/clu.0.
MissingOutputException in line 88 of /home/rsiani/PopCOGenT-master/src/flexible_genome_sweeps/Snakefile:
Missing files after 5 seconds:
proc/acidovorax/clusters/clu.0
This might be due to filesystem latency. If that is the case, consider to increase the wait time with --latency-wait.
Removing output files of failed job run_mmseqs since they might be corrupted:
proc/acidovorax/clusters/DB.0
Will exit after finishing currently running jobs.
Exiting because a job execution failed. Look above for error message
Have you got any idea of what could have caused it? Thanks in advance and congratulations for your work!
Hi, I have been using your script on my data but an error occurred using flexible_genome_sweeps:
Waiting at most 5 seconds for missing files. Error in job run_mmseqs while creating output files proc/acidovorax/clusters/DB.0, proc/acidovorax/clusters/clu.0. MissingOutputException in line 88 of /home/rsiani/PopCOGenT-master/src/flexible_genome_sweeps/Snakefile: Missing files after 5 seconds: proc/acidovorax/clusters/clu.0 This might be due to filesystem latency. If that is the case, consider to increase the wait time with --latency-wait. Removing output files of failed job run_mmseqs since they might be corrupted: proc/acidovorax/clusters/DB.0 Will exit after finishing currently running jobs. Exiting because a job execution failed. Look above for error message
Have you got any idea of what could have caused it? Thanks in advance and congratulations for your work!