Sort bam files generated by ngmlr

philres / ngmlr

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

MIT License

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Sort bam files generated by ngmlr #36

Closed woodoo46 closed 6 years ago

woodoo46 commented 6 years ago

Hello,

I am just wondering which tool is suitable for sorting ngmlr bam files?

Thanks.

fritzsedlazeck commented 6 years ago

I always use samtools sort