Open shaul-pollak opened 3 years ago
hm. likely I'm not catching the case when there are no results in this step -- could you send me the corresponding genome to replicate?
Thanks for the quick reply! here it is. genome.txt
do there any solutions about this issue?
what error msg do you get? what genome are you using as input?
Ok this error occurs when there are no prophages found in the genome. Will catch this error in the next release, thx for reporting.
First off - thanks for this tool! i ran the workflow on the test dataset with no problems, but I've been trying to test it on some genomes we sequenced, and am getting an error at the interval finding step.
This is the error message:
Looking at the aln.m8 file in the relevant dir shows only a single hit.