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phnmnl / container-galaxy-k8s-runtime

PhenoMeNal runtime for Galaxy running inside a container orchestrator
Apache License 2.0
5 stars 18 forks source link

Upgrade biosigner tool. #239

Closed pkrog closed 6 years ago

pkrog commented 6 years ago

I'm unable to test at the moment in minikube. It gives the message: 0/1 nodes are available: 1 Insufficient cpu..

rrueedi commented 6 years ago

@pkrog I've had this problem too. Try changing the performance settings to use 0.5 CPU; that worked for me.

pkrog commented 6 years ago

Hi @rrueedi , sorry I fail to understand, where should I should set that setting?

rrueedi commented 6 years ago

On the tool page in Galaxy, below the tool parameters, there should be a performance settings box. There's 4 settings, 2 for CPU, 2 for RAM. If you set the 2 for CPU to 0.5 each (instead of 0), the tool should run. (Assuming you're having the same issue I was.)

pkrog commented 6 years ago

Thanks @rrueedi , I used though another trick to get tests passing. Please @ilveroluca , could you review?