Patch for k8s runner: fix for logs added by @ilveroluca

phnmnl / container-galaxy-k8s-runtime

PhenoMeNal runtime for Galaxy running inside a container orchestrator

Apache License 2.0

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Patch for k8s runner: fix for logs added by @ilveroluca #334

Closed pcm32 closed 5 years ago

pcm32 commented 5 years ago

This PR should hopefully include code PR'ed by @ilveroluca in the past to the Galaxy project which handles the stuck jobs produced by log files that are not found.

pcm32 commented 5 years ago

Mmm... apparently this file also doesn't contain the logging changes, which were only incorporated in 19.01.

pcm32 commented 5 years ago

We need to retrieve the k8s runner used here https://github.com/galaxyproject/galaxy/pull/6886