search

physiopy / physioqc

Toolbox for physiological data (Automagic) Quality Control
Apache License 2.0
2 stars 8 forks source link

The sampling frequency should be read from the data #8

Open celprov opened 1 year ago

celprov commented 1 year ago

Stuff that needs to be addressed after the code developed for OHBM23.

For now, the sampling frequency as randomly chosen value. Please implement so that the sampling frequency gets read automatically from the data.

goodalse2019 commented 4 months ago

Notes for my own help: BIDS accepted physio format will have the sampling frequency in the JSON file so if we are having it read in "BIDS" format then that could be how it is pulled.

m-miedema commented 4 months ago

We've talked about @maestroque implementing this in physutils! Hopefully physioQC will be able to make use of that package?

The idea is to be able to instantiate a Physio object from a BIDS folder with the appropriate labels and json info (e.g. subject label, sampling rate, etc).