picrust / picrust2

Code, unit tests, and tutorials for running PICRUSt2
GNU General Public License v3.0
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picrust2 installation #327

Closed WillErickson1 closed 8 months ago

WillErickson1 commented 1 year ago

Hello can I install picrust2 using this command :conda create -n picrust2 -c bioconda -c conda-forge picrust 2=2.5.2 instead of mamba create -n picrust2 -c bioconda -c conda-forge picrust2=2.5.2 because I don't have mamba on my linux. does the installation of picrust2 using conda takes too much time ?

R-Wright-1 commented 1 year ago

You don't necessarily need to install mamba, and could use the conda command instead - as mentioned on the install page, though, it may take a long time. If you're trying to avoid using mamba then you could also try using the install from source instructions and replacing mamba with conda there.

lingvv commented 10 months ago

Hello! If your installation process is referring to this https://github.com/picrust/picrust2/wiki/Installation

You may replace mamba with conda instead

The original code: mamba env create -f picrust2-env.yaml

Replacement Code: conda env create -n picrust2 --file picrust2-env.yaml

Hope this helps!

R-Wright-1 commented 8 months ago

I am just closing this issue as there hasn't been any follow-up for a while. Please let me know if this needs to be reopened.