Model output - JSON data with inconsistent types

kamurani commented 6 months ago

Hello,

Not sure if this is an issue with the webserver only, but looking at the statistics.json file after running a model, it appears that the model confidence metrics are encoded as strings, except the cdr3a_plddt and cdr3b_plddt scores.

Is there any reason for this?

Example

{
    "ranked_0": {
        "model_confidence": "0.8622094003450296",
        "plddt": "91.89734278967342",
        "ptm": "0.8834439953622326",
        "iptm": "0.85690075",
        "tcr-pmhc_iptm": "0.8189073889850327",
        "cdr3a_plddt": 71.72926654290715,
        "cdr3b_plddt": 78.55616743449073
    },

rui-yin commented 6 months ago

Hi Kâmuran,

Thank you for bringing this to our attention. The reason for the inconsistent data types issue is that the scores are being read or calculated differently. We will adjust the code to make the output uniform in the next few days.

Best, Rui

shayanask commented 6 months ago

Hi Kâmuran,

The code has been adjusted. The output should be of the same type now.

piercelab / tcrmodel2

Model output - JSON data with inconsistent types #19