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pierrepo / PBxplore

A suite of tools to explore protein structures with Protein Blocks :snake:
https://pbxplore.readthedocs.org/en/latest/
MIT License
28 stars 17 forks source link

Reduce file redundancy in demo and test directories #41

Closed pierrepo closed 9 years ago

pierrepo commented 9 years ago

Some structures files in the test_data directory are redundant with some from the demo1 or demo2 directory. Could we reduce this redundancy by taking source structures files for test in the demoX directory? Symlinks are not good idear since probably not cross plateform. If needed, we can merge demo1 and demo2 directories into a single demo dir.

jbarnoud commented 9 years ago

It could be done. Yet, I would prefer the tests to remain as independent from the rest as possible.

pierrepo commented 9 years ago

OK. For me. Maybe I'll try to reduce the size of some test files....

jbarnoud commented 9 years ago

On 10/03/15 14:58, Pierre Poulain wrote:

OK. For me. Maybe I'll try to reduce the size of some test files....

— Reply to this email directly or view it on GitHub https://github.com/pierrepo/PBxplore/issues/41#issuecomment-78057746.

The PDBs with multiple models and the trajectories are easy target here. demo2/md_traj.pdb especially makes the demo super slow and quite painful to run.