Allows to choose the file format of weblogos in PBstat

pierrepo / PBxplore

A suite of tools to explore protein structures with Protein Blocks :snake:

https://pbxplore.readthedocs.org/en/latest/

MIT License

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Allows to choose the file format of weblogos in PBstat #74

Closed jbarnoud closed 8 years ago

jbarnoud commented 8 years ago

As stated in #73, PBstat only produces weblogos in PDF format. Yet, weblogo can produce logos in a much larger variety of formats.

This PR adds the --logo-format option to PBstat. This option allows to chosse the file format for weblogos. The PR also adapt demo2 to reflect the change, and add extra tests to the regression test suite.

Fix #73

jbarnoud commented 8 years ago

As suggested by @pierrepo in #73, I replaced --logo-format by --image-format.

pierrepo commented 8 years ago

One last thing (sorry). Is it possible to have ".jpg" instead of ".jpeg"? I like the traditional 3-letters file extension.

jbarnoud commented 8 years ago

@pierrepo No problem. Done.