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pieterjanvc / mgs2amr

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Metacherchant Dependency Issue #5

Closed HoangSon710 closed 7 months ago

HoangSon710 commented 9 months ago

Dear Dr. Pieter-Jan Van Camp,

I am writing to seek your guidance regarding an issue I encountered while trying to run the MGS2AMR pipeline described in your article "MGS2AMR: a gene-centric mining of metagenomic sequencing data for pathogens and their antimicrobial resistance profile."

During the process of building the environment, I received an error message stating that a Metacherchant dependent package was not recognized. I would greatly appreciate any insights or troubleshooting steps you could provide to resolve this problem.

Thank you for your time and consideration. I am looking forward to hearing from you soon.

Son Hoang image image image

shaodongyan commented 9 months ago

Metacherchant in mgs2amr's tools folder

pieterjanvc commented 9 months ago

Hello,

I recently made a few bug fixes and I would recommend you to use the latest release to ensure you have the most recent version of the pipeline.

Thanks