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pilirod70 / ngopt

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A5 assembly stats #13

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago 
Branch name: 20130712_miseq_longread

Purpose of code changes on this branch:  Added stats gathering and printing to 
assess quality of data used for the assembly.  Comparison between raw reads and 
bases with EC reads and bases.
If a large % of reads pass the QC but a much lower % of bases pass the QC would 
be a hint at a big drop in read quality after a particular read length.

When reviewing my code changes, please focus on: accuracy of files used.

After the review, I'll merge this branch into:
/trunk

Original issue reported on code.google.com by guillaum...@gmail.com on 21 Jan 2014 at 10:21

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