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pinellolab / STREAM

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
http://stream.pinellolab.org
GNU Affero General Public License v3.0
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A known bug related to `select_variable_genes` #146

Open SummerColdWind opened 8 months ago

SummerColdWind commented 8 months ago

When using the select_variable_genes method on an AnnData object, if adata.X is a sparse matrix, an error will be raised. Therefore, we must first execute:adata.X = adata.X.toarray()