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pinskylab / genomics

Wrangling of genomic data and identity analysis
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Genepop won't write to be readable by Cervus #16

Closed mstuart1 closed 5 years ago

mstuart1 commented 5 years ago

It appears that the names of samples are missing. Working with remove_regenos.Rmd to generate a genepop that serves can read.

katcatalano commented 5 years ago

Okay, sounds good.

On Monday, April 15, 2019, Michelle Stuart notifications@github.com wrote:

It appears that the names of samples are missing. Working with remove_regenos.Rmd https://github.com/pinskylab/genomics/blob/master/scripts/remove_regenos.Rmd to generate a genepop that serves can read.

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mstuart1 commented 5 years ago

Had changed name of names column to ligation_id to avoid conflicts with the names() function and this had caused writing issues at the genepop writing portion of the code. Now fixed and cervus is running id analysis