The genome IDs, as obtained directly from GTDB, have two-letter prefixes RS or GB which indicate whether or not the genome was obtained from RefSeq or GenBank. These are causing search issues, as query genome IDs are not finding hits in the database (when they should). I should re-upload everything without these prefixes, and perhaps add a column indicating the origin of the sequence.
pipparichter
commented
5 months ago
The genome IDs, as obtained directly from GTDB, have two-letter prefixes RS or GB which indicate whether or not the genome was obtained from RefSeq or GenBank. These are causing search issues, as query genome IDs are not finding hits in the database (when they should). I should re-upload everything without these prefixes, and perhaps add a column indicating the origin of the sequence.