search

pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
https://pirovc.github.io/ganon/
MIT License
87 stars 13 forks source link

Feature/report stats struct #178

Closed pirovc closed 3 years ago

pirovc commented 3 years ago

Improve structure for reports and stats, avoid use of atomic integers and better code.

codecov-commenter commented 3 years ago

Codecov Report

Merging #178 (1167cda) into dev (5edefce) will decrease coverage by 0.81%. The diff coverage is 52.80%.

Impacted file tree graph

@@            Coverage Diff             @@
##              dev     #178      +/-   ##
==========================================
- Coverage   78.02%   77.21%   -0.82%     
==========================================
  Files          22       22              
  Lines        2585     2633      +48     
==========================================
+ Hits         2017     2033      +16     
- Misses        568      600      +32
Impacted Files Coverage Δ
src/ganon-classify/GanonClassify.cpp 79.15% <52.80%> (-4.88%) :arrow_down:

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update 5edefce...1167cda. Read the comment docs.