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pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
https://pirovc.github.io/ganon/
MIT License
86 stars 13 forks source link

Feature/codecov target tests #213

Closed pirovc closed 2 years ago

codecov-commenter commented 2 years ago

Codecov Report

Merging #213 (022fdc9) into dev (5f25fd6) will increase coverage by 10.53%. The diff coverage is 68.42%.

@@             Coverage Diff             @@
##              dev     #213       +/-   ##
===========================================
+ Coverage   76.58%   87.11%   +10.53%     
===========================================
  Files          18       14        -4     
  Lines        2605     1366     -1239     
===========================================
- Hits         1995     1190      -805     
+ Misses        610      176      -434
Impacted Files Coverage Δ
src/ganon-build/GanonBuild.cpp 96.55% <66.66%> (+10.34%) :arrow_up:
src/ganon-classify/GanonClassify.cpp 90.87% <68.75%> (+16.96%) :arrow_up:
src/ganon/util.py
src/ganon/classify.py
src/ganon/build_update.py
src/ganon/config.py
src/ganon/ganon.py
src/ganon/tax_util.py
src/ganon/table.py
src/ganon/report.py
... and 10 more

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