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pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
https://pirovc.github.io/ganon/
MIT License
86 stars 13 forks source link

Feature/improve test coverage #223

Closed pirovc closed 1 year ago

codecov-commenter commented 1 year ago

Codecov Report

Merging #223 (c39121f) into dev (d936573) will increase coverage by 2.46%. The diff coverage is 100.00%.

@@            Coverage Diff             @@
##              dev     #223      +/-   ##
==========================================
+ Coverage   84.12%   86.58%   +2.46%     
==========================================
  Files          22       22              
  Lines        2966     2975       +9     
==========================================
+ Hits         2495     2576      +81     
+ Misses        471      399      -72
Impacted Files Coverage Δ
src/ganon/build_update.py 87.94% <100.00%> (+22.37%) :arrow_up:
src/ganon/config.py 81.43% <100.00%> (+2.09%) :arrow_up:
src/ganon/util.py 79.31% <0.00%> (+3.44%) :arrow_up:
src/ganon/ganon.py 85.71% <0.00%> (+5.71%) :arrow_up:

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