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pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
https://pirovc.github.io/ganon/
MIT License
86 stars 13 forks source link

Feature/better optimal size selection #231

Closed pirovc closed 1 year ago

codecov-commenter commented 1 year ago

Codecov Report

Merging #231 (59505d4) into dev (7001788) will decrease coverage by 0.11%. The diff coverage is 100.00%.

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@@            Coverage Diff             @@
##              dev     #231      +/-   ##
==========================================
- Coverage   87.82%   87.71%   -0.11%     
==========================================
  Files          22       22              
  Lines        3005     3020      +15     
==========================================
+ Hits         2639     2649      +10     
- Misses        366      371       +5
Impacted Files Coverage Δ
src/ganon-build/GanonBuild.cpp 96.49% <100.00%> (+0.14%) :arrow_up:
src/ganon/report.py 90.98% <0.00%> (-1.33%) :arrow_down:

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