pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
https://pirovc.github.io/ganon/
MIT License
86 stars 13 forks source link

ganon version 2.1.0 #285

Closed pirovc closed 6 months ago

pirovc commented 6 months ago

Thanks @jfy133 for reporting!

codecov-commenter commented 6 months ago

Codecov Report

Attention: 5 lines in your changes are missing coverage. Please review.

Comparison is base (10c1965) 88.56% compared to head (1dfd757) 89.80%. Report is 1 commits behind head on master.

Files Patch % Lines
src/ganon/build_update.py 94.28% 2 Missing :warning:
src/ganon/tax_util.py 91.66% 2 Missing :warning:
src/ganon/util.py 75.00% 1 Missing :warning:

:exclamation: Your organization needs to install the Codecov GitHub app to enable full functionality.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #285 +/- ## ========================================== + Coverage 88.56% 89.80% +1.23% ========================================== Files 23 23 Lines 3524 3500 -24 ========================================== + Hits 3121 3143 +22 + Misses 403 357 -46 ```

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.