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pjotrp / genfrag

TDF predictor - copy of Rubyforge site
http://rubyforge.org/projects/genfrag/
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Ruby 1.9.2 gives different results on indexing over 1.8.7 #1

Open pjotrp opened 11 years ago

pjotrp commented 11 years ago

E.g. running ./bin/genfrag index -f test/data/test.fa --RE5 BstYI --RE3 MseI

1.9.2 results in

101 55 4060 226, 891 240, 6530 252, 3580 366

1.8.7 results in

2 55 3580 201, 4060 276, 891 476, 6530 477

pjotrp commented 11 years ago

Basically, the fragments sizes found are the same, but the indexing differs.