convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
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support "male non-pseudoautosomal X-chromosome genotypes to be coded as homozygous diploid genotypes" #16
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plantimals closed 2 years ago
In order to support using 2vcf output with Beagle imputation or phasing:
implement a command line option to allow users to generate beagle compatible VCFs