BLR UI interface (new) - Githubissues

myrmoteras commented 12 months ago

Dear Donat, Terry, Felipe,

@flsimoes @tcatapano @teodorgeorgiev @lyubomirpenev @plazi/poa-office

Jenny is working on improving the record pages for BLR. Could you please review the mockups below and let me know any feedback you have.

The mockups show journal article record page. The page has a new section “Related works" which displays related figures and taxonomic treatments from the BLR community. Related is defined as all records with a “Is part of” relation linking back to the journal article.

Additionally:

You can toggle between a) list view and 2) thumbnail view - which should be the default?
You can filter by resource type using the drop-down
You can search through the record

Some things you cannot do:

Change the sort order
Change the number of results shown (e.g. 10, 20, 50, 100)

Best regards, Lars

myrmoteras commented 12 months ago

Dear all,

Any feedback? Jenny will start implement this now and only have the next two weeks to finish it up (she’s ending her contract Dec 22).

Cheers, Lars

flsimoes commented 12 months ago

Hi Lars

Sorry for not replying sooner. I'll check with the team and get back to you later today or early tomorrow with our suggestions.

All the best Felipe

myrmoteras commented 11 months ago

Hi Lars

The viewing options and how they are presented seem all fine. The two questions we have though are about the naming of the "Related Works" section itself.

1) I understand why the section is named "Related Works", but it can be misinterpreted as "other articles" or "other publications". Not really sure what it could be called though... Maybe "Related Content"? 2) It occurs twice in the page, which can be quite confusing. I suggest adding something at the end of the bottom one, such as "Related Works list", "Related Works links" or something like that.

All the best Felipe

myrmoteras commented 11 months ago

Hi Lars and Jenny

Her some more comments

Article

https://zenodo.org/records/10244718

Add under "has part"

ALSO the Doi or link to the treatment in BLR/Zenodo
If possible the name of the taxon, which is given in the treatment as "sec:

In the references section, might it be possible to hyperlink the Doi, if available?

Thanks for looking into this Donat

myrmoteras commented 11 months ago

Hi Jenny and Lars One more issue. In the previous version of Zenodo, there has been a link from the journal article page to GBIF. In this case, there would be a link from https://zenodo.org/records/10244652 to https://www.gbif.org/dataset/ac0e6a04-e3b0-4e9d-b584-33176aab08b3.

There could, and in fact should be a link (is source of” from a treatment to the GBIF treatment, eg from http://zenodo.org/record/10250370 to http://www.gbif.org/species/219495280

If the GBIF specie ID is not provided, we might want to ask Guido to do so?

Thanks for looking into this too

Donat

myrmoteras commented 11 months ago

Hi,

Thanks for the feedback.

####### Landing page mockups

From what I get there’s the following things:

1) "Related works” is not a good name What one of these:

Linked records
Related records
Record parts
Related community records
Relationships
Record relations
Associated work
Parts
Subparts
Record package

2) “References” section - if there’s a link we should make it clickable. @Jenny (you should be able to "| urlize” Jinja template filter for this.

####### External resources Yes, there should be links to GBIF, TB and SIBLS under the External Resources like this image (ignore the wrong logo’s / alignment)

TreatmentBank

if alternate identifier has a link to http://publication.plazi.org/id/<id>
or, if alternate identifier has a link to http://treatment.plazi.org/id/<id>

GBIF

if related identifiers has link to www.gbif.org with relation is source of

SIBLS

if related identifies has link to https://sibils.text-analytics.ch/… with relation is source of

Cheers, Lars

myrmoteras commented 11 months ago

Dear colleagues @lyubomirpenev @teodorgeorgiev Laurence, @tcatapano

I know, this is on a very short note, and I am sorry that I only thought about this today, but please have a look today at the new UI of BLR. But I think it is nevertheless better to get you involved as well.

BLR moved to a new version of InvenioRDM which allows more flexibility and with that also regarding the access to data and how the deposits and its metadata is displayed. It also offers new ways to administer access – which I will explain later.

For today, please look at the UI and let us know, whether you see something that needs attention, change immediately. There is always a chance to for implementing changes later. You can also ask other member of the team.

Right now, these are the pages

Entire article https://zenodo.org/records/8402224
Figure https://zenodo.org/records/8402234
Taxonomic Treatment https://zenodo.org/records/8407968
Physical specimen https://zenodo.org/records/6083947
Photo https://zenodo.org/records/6084035

Thanks for taking a moment

Donat

lyubomirpenev commented 11 months ago

The new UI looks fine at a very first glance! Congratulations!

Will it be only EJT and Zootaxa that will be granted with presence there or Pensoft's content will be displayed in similar manner as well?

On 7.12.2023 г. 11:05, Donat Agosti wrote:

Dear colleagues @lyubomirpenev https://github.com/lyubomirpenev @teodorgeorgiev https://github.com/teodorgeorgiev Laurence, @tcatapano https://github.com/tcatapano

I know, this is on a very short note, and I am sorry that I only thought about this today, but please have a look today at the new UI of BLR. But I think it is nevertheless better to get you involved as well.

BLR moved to a new version of InvenioRDM which allows more flexibility and with that also regarding the access to data and how the deposits and its metadata is displayed. It also offers new ways to administer access – which I will explain later.

For today, please look at the UI and let us know, whether you see something that needs attention, change immediately. There is always a chance to for implementing changes later. You can also ask other member of the team.

Right now, these are the pages

Entire article https://zenodo.org/records/8402224

Figure https://zenodo.org/records/8402234

Taxonomic Treatment https://zenodo.org/records/8407968

Physical specimen https://zenodo.org/records/6083947

Photo https://zenodo.org/records/6084035

Thanks for taking a moment

Donat

— Reply to this email directly, view it on GitHub https://github.com/plazi/arcadia-project/issues/237#issuecomment-1844955277, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABDFNGMIVF44XB6HZZEQWPDYIGBGLAVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBUHE2TKMRXG4. You are receiving this because you were mentioned.Message ID: @.***>

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Prof. Dr. Lyubomir Penev Managing Director Pensoft Publishers https://pensoft.net Phone: +359-2-8704281 12 Prof. Georgi Zlatarski Street 1700 Sofia, Bulgaria https://twitter.com/Pensoft https://www.facebook.com/Pensoft/ https://www.linkedin.com/company/pensoft-publishers/ Blog https://blog.pensoft.net

myrmoteras commented 11 months ago

Hi Lyubo

Thanks for your feedback.

All journals, figures, treatments irrespective of their origin.

What we should discuss with Pensoft is metadata you attach to the deposits you make Cheers Donat

Get Outlook for Androidhttps://aka.ms/AAb9ysg

From: Lyubomir Penev @.> Sent: Thursday, December 7, 2023 10:41:03 AM To: plazi/arcadia-project @.> Cc: Donat Agosti @.>; Author @.> Subject: Re: [plazi/arcadia-project] BLR UI interface (new) (Issue #237)

EXTERNAL SENDER

The new UI looks fine at a very first glance! Congratulations!

Will it be only EJT and Zootaxa that will be granted with presence there or Pensoft's content will be displayed in similar manner as well?

On 7.12.2023 г. 11:05, Donat Agosti wrote:

Dear colleagues @lyubomirpenev https://github.com/lyubomirpenev @teodorgeorgiev https://github.com/teodorgeorgiev Laurence, @tcatapano https://github.com/tcatapano

I know, this is on a very short note, and I am sorry that I only thought about this today, but please have a look today at the new UI of BLR. But I think it is nevertheless better to get you involved as well.

BLR moved to a new version of InvenioRDM which allows more flexibility and with that also regarding the access to data and how the deposits and its metadata is displayed. It also offers new ways to administer access – which I will explain later.

For today, please look at the UI and let us know, whether you see something that needs attention, change immediately. There is always a chance to for implementing changes later. You can also ask other member of the team.

Right now, these are the pages

Entire article https://zenodo.org/records/8402224

Figure https://zenodo.org/records/8402234

Taxonomic Treatment https://zenodo.org/records/8407968

Physical specimen https://zenodo.org/records/6083947

Photo https://zenodo.org/records/6084035

Thanks for taking a moment

Donat

— Reply to this email directly, view it on GitHub https://github.com/plazi/arcadia-project/issues/237#issuecomment-1844955277, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABDFNGMIVF44XB6HZZEQWPDYIGBGLAVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBUHE2TKMRXG4. You are receiving this because you were mentioned.Message ID: @.***>

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Pensoft logo https://pensoft.net Prof. Dr. Lyubomir Penev Managing Director Pensoft Publishers https://pensoft.net Phone: +359-2-8704281 12 Prof. Georgi Zlatarski Street 1700 Sofia, Bulgaria https://twitter.com/Pensoft https://www.facebook.com/Pensoft/ https://www.linkedin.com/company/pensoft-publishers/ Blog https://blog.pensoft.net

— Reply to this email directly, view it on GitHubhttps://github.com/plazi/arcadia-project/issues/237#issuecomment-1845009018, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ABDFPJHRJ5IXZNRTHF3MVGLYIGFK7AVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBVGAYDSMBRHA. You are receiving this because you authored the thread.Message ID: @.***>

lyubomirpenev commented 11 months ago

Very good! Now is the time we need to schedule a chat about that. How about early next week, say, on Monday (almost anytime)?

On 7.12.2023 г. 11:54, Donat Agosti wrote:

Hi Lyubo

Thanks for your feedback.

All journals, figures, treatments irrespective of their origin.

What we should discuss with Pensoft is metadata you attach to the deposits you make Cheers Donat

Get Outlook for Androidhttps://aka.ms/AAb9ysg

From: Lyubomir Penev @.> Sent: Thursday, December 7, 2023 10:41:03 AM To: plazi/arcadia-project @.> Cc: Donat Agosti @.>; Author @.> Subject: Re: [plazi/arcadia-project] BLR UI interface (new) (Issue #237)

EXTERNAL SENDER

The new UI looks fine at a very first glance! Congratulations!

Will it be only EJT and Zootaxa that will be granted with presence there or Pensoft's content will be displayed in similar manner as well?

On 7.12.2023 г. 11:05, Donat Agosti wrote:

Dear colleagues @lyubomirpenev https://github.com/lyubomirpenev @teodorgeorgiev https://github.com/teodorgeorgiev Laurence, @tcatapano https://github.com/tcatapano

I know, this is on a very short note, and I am sorry that I only thought about this today, but please have a look today at the new UI of BLR. But I think it is nevertheless better to get you involved as well.

BLR moved to a new version of InvenioRDM which allows more flexibility and with that also regarding the access to data and how the deposits and its metadata is displayed. It also offers new ways to administer access – which I will explain later.

For today, please look at the UI and let us know, whether you see something that needs attention, change immediately. There is always a chance to for implementing changes later. You can also ask other member of the team.

Right now, these are the pages

Entire article https://zenodo.org/records/8402224

Figure https://zenodo.org/records/8402234

Taxonomic Treatment https://zenodo.org/records/8407968

Physical specimen https://zenodo.org/records/6083947

Photo https://zenodo.org/records/6084035

Thanks for taking a moment

Donat

— Reply to this email directly, view it on GitHub

https://github.com/plazi/arcadia-project/issues/237#issuecomment-1844955277, or unsubscribe

https://github.com/notifications/unsubscribe-auth/ABDFNGMIVF44XB6HZZEQWPDYIGBGLAVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBUHE2TKMRXG4. You are receiving this because you were mentioned.Message ID: @.***>

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Pensoft logo https://pensoft.net Prof. Dr. Lyubomir Penev Managing Director Pensoft Publishers https://pensoft.net Phone: +359-2-8704281 12 Prof. Georgi Zlatarski Street 1700 Sofia, Bulgaria https://twitter.com/Pensoft https://www.facebook.com/Pensoft/ https://www.linkedin.com/company/pensoft-publishers/ Blog https://blog.pensoft.net

— Reply to this email directly, view it on GitHubhttps://github.com/plazi/arcadia-project/issues/237#issuecomment-1845009018, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ABDFPJHRJ5IXZNRTHF3MVGLYIGFK7AVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBVGAYDSMBRHA. You are receiving this because you authored the thread.Message ID: @.***>

— Reply to this email directly, view it on GitHub https://github.com/plazi/arcadia-project/issues/237#issuecomment-1845028938, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABDFNGNW67OUJOQNIICBKLDYIGG4NAVCNFSM6AAAAAA77VUAA6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQNBVGAZDQOJTHA. You are receiving this because you were mentioned.Message ID: @.***>

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Pensoft logo https://pensoft.net
Prof. Dr. Lyubomir Penev Managing Director Pensoft Publishers https://pensoft.net Phone: +359-2-8704281 12 Prof. Georgi Zlatarski Street 1700 Sofia, Bulgaria https://twitter.com/Pensoft https://www.facebook.com/Pensoft/ https://www.linkedin.com/company/pensoft-publishers/ Blog https://blog.pensoft.net

myrmoteras commented 11 months ago

@lnielsen

Adding additional is source of

Guido will import at least an additional URL for a source in GBIF in treatment an additional link to the article

Add taxonomic names to treatment links in the article metadata and figure metadata,

e,g, Kamabrachys signata (Distant, 1892) sec. Constant, 2023

. The source of the name could be:

"openbiodiv:TaxonomicConceptLabel": [ "Kamabrachys signata (Distant, 1892) sec. Constant, 2023" or "title": "Kamabrachys signata Constant 2023, gen. et comb. nov."

source: https://zenodo.org/records/8407988

myrmoteras commented 11 months ago

can this be changed into

ant, J. (2023). Fig. 5. Kamabrachys spp., distribution maps. A. K, in Revision of the Eurybrachidae (XVII). The new Australian genus Kamabrachys gen. nov. with ten new species (Hemiptera: Fulgoromorpha). European Journal of Taxonomy, Vol. 895 (1), p. 1 133). https://doi.org/10.5281/zenodo.8402234

make sure, where the citation of the article begins.

and remove zenodo in front of the https://doi...

https://zenodo.org/records/8402234

myrmoteras commented 11 months ago

Add Figure number provided in the caption to the figure, which would make it much easier to find the respective figure-

plazi / arcadia-project

BLR UI interface (new) #237

Adding additional is source of

Add taxonomic names to treatment links in the article metadata and figure metadata,