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plger / scDblFinder

Methods for detecting doublets in single-cell sequencing data
https://plger.github.io/scDblFinder/
GNU General Public License v3.0
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I'm having an issues with sctransform not sure #74

Closed zvan14 closed 1 year ago

zvan14 commented 1 year ago

I'm somewhat new to using this so I am not sure how to fix it.

Org_nodoub <- processing_seurat_sctransform(Org_nodoub, vars_to_regress = c("nCount_RNA","percent.mito","percent.ribo"), npcs = 30, res = 0.5) Error in qr.resid(qr = qr, y = data.expr[x, ]) : 'qr' and 'y' must have the same number of rows

plger commented 1 year ago

This repo is neither about seurat nor sctransform, and I've never heard of processing_seurat_sctransform. You probably want to talk to whoever wrote that wrapper function.