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plotly / dash-bio

Open-source bioinformatics components for Dash
https://dash-gallery.plotly.host/Portal/?search=Bioinformatics
MIT License
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missing index.py file #541

Closed akmorrow13 closed 3 years ago

akmorrow13 commented 3 years ago

Describe the bug

https://github.com/plotly/dash-bio/blob/master/CONTRIBUTING.md testing documentation is out of date. It says to run python index.py but there is no index.py file.

To Reproduce

Try running python index.py (no file)

Expected behavior

There should be an index.py file.

xhluca commented 3 years ago

The index.py was removed in this PR: https://github.com/plotly/dash-bio/pull/459 This is the specific commit that removed index.py: https://github.com/plotly/dash-bio/commit/ec969d2cccdb4eab1d9b0549372b477bc18bdd92

The PR gives more detail, but it was essentially removed since each of the apps have been deployed separately. I think it's still possible to access the individual apps (which are now located inside of tests for some reason). For example for dash-alignment:

python3 -m venv venv_alignment
# or: python -m venv venv_alignment
source venv_alignment/bin/activate
cd tests/dashbio_demos/dash-alignment-charts
pip3 install -r requirements.txt  # or pip
python3 app.py  # or python

Unless there was some deployment errors the demos should be available here: