pmelsted / pizzly

Fast fusion detection using kallisto
BSD 2-Clause "Simplified" License
80 stars 10 forks source link

GTF file must be sorted in gene->transcript->exon order #22

Open roryk opened 6 years ago

roryk commented 6 years ago

This isn't a bug, but would be useful to add to the documentation: GTF files need to be sorted in gene->transcript->exon order or else pizzly segfaults when making the index. Happy to add a blurb to the documentation but don't want to make the existing pull requests more complicated.