build: support flang

[teamblubee]

Hello

I am running into a bug that seems to stem from the linker flangs --whole-archive.

It's a bug similar to this one: https://github.com/bioinformatics-centre/kaiju/issues/30 -soname can be fixed by using -install_name as well.

Although I am not on OS X using LLVM and Clang, the whole-archive flag will cause compilation failure.

Would someone be able to address this issue?

--- src/binding/fortran/use_mpi/mpi.mod-stamp ---
  MOD      src/binding/fortran/use_mpi/mpi.mod-stamp
--- lib/libmpi.la ---
clang-6.0: error: unsupported option '--whole-archive'
clang-6.0: error: unsupported option '--no-whole-archive'
clang-6.0: error: unknown argument: '-soname'
clang-6.0: error: no such file or directory: 'libmpi.so.0'
*** [lib/libmpi.la] Error code 1

[teamblubee]

I think the error comes from the fact that this fortran compiler isn't gfortran, it's flang: https://github.com/flang-compiler/flang

Here's a make -dA output: https://pastebin.com/uwvSNEeW

https://pastebin.com/DPF4wKb8

fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/hwloc/hwloc/libhwloc_embedded.la src/mpi/romio/libromio.la
clang-6.0: error: unsupported option '--whole-archive'
clang-6.0: error: unsupported option '--no-whole-archive'
clang-6.0: error: unknown argument: '-soname'
clang-6.0: error: no such file or directory: 'libmpi.so.0'

[teamblubee]

./configure --prefix=/usr/local/TEST --enable-static=no --enable-shared=yes \
pac_c_check_compiler_option_prototest=no  --enable-sharedlibs=libtool\
 CFLAGS="-fPIC -Wall" CC=clang FC=flang

configure output

Configuring MPICH version 3.3b3 with  '--prefix=/usr/local/TEST' '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall' 'CC=clang' 'FC=flang'
Running on system: FreeBSD 12amd64-FLANG 12.0-CURRENT FreeBSD 12.0-CURRENT amd64
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking target system type... amd64-unknown-freebsd12.0
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of clang... gcc3
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether make supports nested variables... (cached) yes
checking for icpc... no
checking for pgCC... no
checking for xlC... no
checking for pathCC... no
checking for g++... no
checking for clang++... clang++
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking dependency style of clang++... gcc3
checking how to run the C++ preprocessor... clang++ -E
checking for ld used by clang++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking for clang++ option to produce PIC... -fPIC -DPIC
checking if clang++ PIC flag -fPIC -DPIC works... yes
checking if clang++ static flag -static works... yes
checking if clang++ supports -c -o file.o... yes
checking if clang++ supports -c -o file.o... (cached) yes
checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran compiler... no
checking whether flang accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for flang option to produce PIC... 
checking if flang static flag  works... yes
checking if flang supports -c -o file.o... yes
checking if flang supports -c -o file.o... (cached) yes
checking whether the flang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran 77 compiler... no
checking whether flang accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for flang option to produce PIC... 
checking if flang static flag  works... yes
checking if flang supports -c -o file.o... yes
checking if flang supports -c -o file.o... (cached) yes
checking whether the flang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
Parsing Arguments for OFI Netmod
checking hcoll/api/hcoll_api.h usability... no
checking hcoll/api/hcoll_api.h presence... no
checking for hcoll/api/hcoll_api.h... no
checking for hcoll_init in -lhcoll... no
configure: RUNNING PREREQ FOR ch3:nemesis
configure: ===== configuring src/mpl =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST' --disable-versioning --enable-embedded '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall  ' 'CC=clang' 'FC=flang' --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking dependency style of clang... gcc3
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking the archiver (ar) interface... ar
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking if C compiler supports __builtin_expect... yes
checking for gcov... no
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking for unistd.h... (cached) yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking valgrind.h usability... no
checking valgrind.h presence... no
checking for valgrind.h... no
checking memcheck.h usability... no
checking memcheck.h presence... no
checking for memcheck.h... no
checking valgrind/valgrind.h usability... no
checking valgrind/valgrind.h presence... no
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checking valgrind/memcheck.h usability... no
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checking helgrind.h usability... no
checking helgrind.h presence... no
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checking valgrind/helgrind.h usability... no
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checking drd.h usability... no
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checking whether the valgrind headers are broken or too old... yes
checking for clock_gettime... yes
checking for clock_getres... yes
checking for gethrtime... no
checking for mach_absolute_time... no
checking for gettimeofday... yes
checking for library containing clock_gettime... none required
checking for library containing clock_getres... none required
checking whether struct timespec is defined in time.h... yes
checking for CLOCK_REALTIME defined in time.h... yes
configure: Timer type selected is CLOCK_GETTIME
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for unistd.h... (cached) yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking for sched_yield... yes
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checking for sleep... yes
checking for select... yes
checking whether usleep needs a declaration... no
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking for pthread_yield... yes
checking for pthread_key_create... yes
checking for pthread_cleanup_push... yes
configure: POSIX will be used for thread package.
checking for thread local storage specifier... _Thread_local
checking for pthread_mutex_init... yes
checking for pthread_mutexattr_setpshared... yes
configure: POSIX will be used for interprocess mutex package.
checking for mkstemp... yes
checking whether mkstemp needs a declaration... no
checking for fdopen... yes
checking whether fdopen needs a declaration... yes
checking for getpid... yes
checking for mmap... yes
checking for munmap... yes
configure: Using a memory-mapped file for shared memory
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for strncmp... yes
checking whether strncmp needs a declaration... no
checking for putenv... yes
checking whether putenv needs a declaration... no
checking for strerror... yes
checking whether strerror needs a declaration... no
checking for usleep... (cached) yes
checking whether usleep needs a declaration... (cached) no
checking for posix_memalign... yes
checking for aligned_alloc... yes
checking whether aligned_alloc needs a declaration... no
checking for backtrace_symbols... no
checking whether backtrace_create_state is declared... no
checking whether backtrace_print is declared... no
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking ifaddrs.h usability... yes
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checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking for inet_ntop... yes
checking for getifaddrs... yes
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for __attribute__((aligned))... yes
checking for __attribute__((fallthrough))... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/mpl_timer.h
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: ===== done with src/mpl configure =====
configure: sourcing src/mpl/localdefs
configure: ===== configuring src/openpa =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST' --disable-versioning --enable-embedded --with-atomic-primitives=auto_allow_emulation '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall  ' 'CC=clang' 'FC=flang' --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking for gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking dependency style of clang... gcc3
checking the archiver (ar) interface... ar
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... clang -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether make supports nested variables... (cached) yes
checking for gcc... (cached) clang
checking whether we are using the GNU C compiler... (cached) yes
checking whether clang accepts -g... (cached) yes
checking for clang option to accept ISO C89... (cached) none needed
checking whether clang understands -c and -o together... (cached) yes
checking dependency style of clang... (cached) gcc3
checking whether to enable assertions... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking atomic.h usability... no
checking atomic.h presence... no
checking for atomic.h... no
checking intrin.h usability... no
checking intrin.h presence... no
checking for intrin.h... no
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for an ANSI C-conforming const... yes
checking for pthread_create in -lpthread... yes
checking for pthread_yield... yes
checking if 100 threads can be run at once... yes
checking size of void *... 8
checking size of int... 4
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking if compiler rejects bogus asm statements... yes
checking for support for gcc x86/x86_64 primitives... yes
checking for support for gcc x86 primitives for pre-Pentium 4... yes
checking for support for gcc ia64 primitives... no
checking for support for gcc PowerPC atomics... no
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checking for support for gcc atomic intrinsics... yes
checking for support for Windows NT atomic intrinsics... no
checking for support for Sun atomic operations library... no
checking whether to enable strict fairness checks... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating openpa.pc
config.status: creating src/config.h
config.status: src/config.h is unchanged
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing src/opa_config.h commands
config.status: creating src/opa_config.h - prefix OPA for src/config.h defines
config.status: src/opa_config.h is unchanged
configure: ===== done with src/openpa configure =====
checking for type of weak symbol alias support... no
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking if clang supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
checking for pkg-config... /usr/local/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for X... no

###
### Configuring hwloc core
###
checking hwloc building mode... embedded
configure: hwloc builddir: /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/hwloc
configure: hwloc srcdir: /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/hwloc
checking for hwloc version... 2.0.1rc2-git
checking if want hwloc maintainer support... disabled (embedded mode)
checking for hwloc directory prefix... src/hwloc/
checking for hwloc symbol prefix... hwloc_
checking for clang option to accept ISO C99... none needed
checking size of void *... 8
checking which OS support to include... FreeBSD
checking which CPU support to include... x86_64
checking size of unsigned long... 8
checking size of unsigned int... 4
checking for the C compiler vendor... gnu
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
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checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking whether to enable symbol visibility... no (disabled)
checking whether the C compiler rejects function calls with too many arguments... yes
checking whether the C compiler rejects function calls with too few arguments... yes
checking for unistd.h... (cached) yes
checking dirent.h usability... yes
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checking for strings.h... (cached) yes
checking ctype.h usability... yes
checking ctype.h presence... yes
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configure: WARNING: X11 not found; GL disabled
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checking components to build statically...  noos xml synthetic xml_nolibxml freebsd xml_libxml x86
checking components to build as plugins... 
sourcing /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/pm/hydra/mpichprereq
checking whether the compiler defines __func__... yes
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checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf)
checking whether Fortran 77 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking how to get verbose linking output from flang... -v
checking for Fortran 77 libraries of flang...  -L/usr/local/flang/lib -L/usr/lib -lflangmain -lm -lflang -lflangrti -lomptarget -lompstub -lomp -lpgmath -lgomp -liomp5 -lmp -lexecinfo
checking whether flang accepts the FLIBS found by autoconf... yes
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checking for linker for Fortran main program... Use Fortran to link programs
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checking for libraries to link Fortran main with C stdio routines... none
checking whether Fortran init will work with C... yes
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checking whether the Fortran 90 compiler (flang   ) works... yes
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checking whether Fortran 90 compiler works with Fortran 77 compiler... yes
checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf)
checking whether Fortran 77 accepts ! for comments... yes
checking for include directory flag for Fortran... -I
checking for Fortran 77 flag for library directories... -L
checking whether Fortran 77 compiler processes .F files with C preprocessor... yes
checking whether flang allows mismatched arguments... yes
checking for Fortran 2008 support... no
checking for shared library (esp. rpath) characteristics of FC... done (results in src/env/fc_shlib.conf)
checking whether the Fortran 90 compiler (flang   ) works... yes
checking whether the Fortran 90 compiler (flang   ) is a cross-compiler... no
checking for Fortran 90 module extension... mod
checking for Fortran 90 module include flag... -I
checking for Fortran 90 module output directory flag... -J
checking whether Fortran 90 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes
checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none
checking whether TRUE has been defined... no
checking whether the C++ compiler clang++ can build an executable... yes
checking whether C++ compiler works with string... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking for GNU g++ version... 4 . 2
checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf)
checking whether C++ compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for perl... /usr/local/bin/perl
checking for ar... ar
checking for ranlib... ranlib
checking for killall... killall
checking whether install works... yes
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checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for bash... /usr/local/bin/bash
checking whether /usr/local/bin/bash supports arrays... yes
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking whether __attribute__ allowed... yes
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checking if C compiler supports __builtin_expect... yes
checking whether byte ordering is bigendian... no
checking whether C compiler allows unaligned doubles... yes
checking whether clang supports __func__... yes
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... eight
checking for max C struct floating point alignment... sixteen
checking for max C struct alignment of structs with doubles... eight
checking for max C struct floating point alignment with long doubles... sixteen
configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs.  MPICH does not handle this case automatically and you should avoid assumed extents for structures containing float types.
checking if alignment of structs with doubles is based on position... no
checking if alignment of structs with long long ints is based on position... no
checking if double alignment breaks rules, find actual alignment... no
checking for alignment restrictions on pointers... int or better
checking size of char... 1
checking size of unsigned char... 1
checking size of short... 2
checking size of unsigned short... 2
checking size of int... 4
checking size of unsigned int... (cached) 4
checking size of long... 8
checking size of unsigned long... (cached) 8
checking size of long long... 8
checking size of unsigned long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of void *... (cached) 8
checking for ANSI C header files... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
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checking size of wchar_t... 4
checking size of float_int... 8
checking size of double_int... 16
checking size of long_int... 16
checking size of short_int... 8
checking size of two_int... 8
checking size of long_double_int... 32
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checking size of _Bool... 1
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for size of Fortran type integer... 4
checking for size of Fortran type real... 4
checking for size of Fortran type double precision... 8
checking whether integer*1 is supported... yes
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checking for C type matching Fortran real... float
checking for C type matching Fortran double... double
checking for C type matching Fortran integer... int
checking for values of Fortran logicals... True is -1 and False is 0
checking for Fortran 90 integer kind for 8-byte integers... 8
checking for Fortran 90 integer kind for 4-byte integers... 4
checking if real*8 is supported in Fortran 90... yes
checking size of bool... 1
checking complex usability... yes
checking complex presence... yes
checking for complex... yes
checking size of Complex... 8
checking size of DoubleComplex... 16
checking size of LongDoubleComplex... 32
checking for alignment restrictions on int64_t... no
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checking stdarg.h usability... yes
checking stdarg.h presence... yes
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checking whether strerror_r returns char *... no
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checking size of MPII_Bsend_data_t... 96
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configure: RUNNING CONFIGURE FOR CH3 DEVICE
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checking whether byte ordering is bigendian... (cached) no
configure: RUNNING CONFIGURE FOR F90 CODE
checking whether ln -s works... yes
checking for extension for Fortran 90 programs... f90
checking for the precision and range of reals...  6 , 37
checking for the precision and range of double precision...  15 , 307
checking for the range of integer...  9
checking for available integer kinds...  2 , 1, 4 , 2, 9 , 4, 18 , 8,
checking for available integer ranges...  {  2 , 1 , 1 }, {  4 , 2 , 2 }, {  9 , 4 , 4 }, {  18 , 8 , 8 },
checking for unistd.h... (cached) yes
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checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for library containing setsockopt... none required
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configure: RUNNING CONFIGURE FOR ch3:nemesis
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checking signal.h presence... yes
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checking whether we can use struct ifreq... yes
checking knem_io.h usability... no
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configure: ===== configuring src/mpi/romio =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST'  '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall   -O2' 'CC=clang' 'FC=flang' --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking whether make supports the include directive... yes (GNU style)
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking dependency style of clang... gcc3
checking for grep that handles long lines and -e... /usr/bin/grep
checking if clang supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
checking how to run the C preprocessor... clang -E
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
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checking for string.h... yes
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checking minix/config.h usability... no
checking minix/config.h presence... no
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checking whether it is safe to define __EXTENSIONS__... yes
checking the archiver (ar) interface... ar
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether make supports nested variables... (cached) yes
Configuring with args dummy mt
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for architecture... freebsd
ROMIO home directory is /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpi/romio
checking whether we are using the GNU Fortran 77 compiler... no
checking whether flang accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for flang option to produce PIC... 
checking if flang static flag  works... yes
checking if flang supports -c -o file.o... yes
checking if flang supports -c -o file.o... (cached) yes
checking whether the flang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran compiler... no
checking whether flang accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for flang option to produce PIC... 
checking if flang static flag  works... yes
checking if flang supports -c -o file.o... yes
checking if flang supports -c -o file.o... (cached) yes
checking whether the flang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking for long long... yes
checking size of long long... 8
checking for memalign... no
checking Fortran external names
Fortran externals have a trailing underscore and are lowercase
checking for inline... inline
checking for size_t... yes
checking for ssize_t... yes
checking for off_t... yes
checking how to run the C preprocessor... clang -E
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking malloc.h usability... no
checking malloc.h presence... no
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checking stddef.h usability... yes
checking stddef.h presence... yes
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checking for sys/types.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking for mpix.h... no
checking for u_char... yes
checking for u_short... yes
checking for u_int... yes
checking for u_long... yes
checking sys/attr.h usability... no
checking sys/attr.h presence... no
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checking size of int... 4
checking size of void *... 8
checking for int large enough for pointers... no
checking size of long long... (cached) 8
checking for extension for Fortran 90 programs... f90
checking for Fortran 90 KIND parameter for 8-byte integers...             8
checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes
Overriding Array test for MPICH
checking for type of weak symbol alias support... no
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking whether struct flock compatible with MPI_Offset... yes
checking for pvfs2-config... notfound
checking configured file systems... testfs ufs nfs
configure: WARNING: File locks may not work with NFS.  See the Installation and
users manual for instructions on testing and if necessary fixing this
checking for library containing aio_write... none required
checking signal.h usability... yes
checking signal.h presence... yes
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checking whether aio routines can be used... yes
checking for obsolete two-argument aio_write... no
checking for obsolete two-argument aio_suspend... no
checking for struct aiocb.aio_fildes... yes
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checking for struct aiocb.aio_handle... no
checking for struct aiocb.aio_reqprio... yes
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checking whether struct statfs properly defined... yes
checking for f_type member of statfs structure... yes
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checking for statvfs... yes
checking for f_basetype member of statvfs structure... no
checking for blksize_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking whether pwrite is declared... yes
checking for strerror... yes
checking for doctext... false
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checking whether fsync needs a declaration... no
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checking whether usleep needs a declaration... no
setting SYSDEP_INC to 
checking for C/C++ restrict keyword... __restrict
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for gcov... no
setting CC to clang
setting F77 to flang
setting TEST_CC to $(bindir)/mpicc
setting TEST_F77 to $(bindir)/mpifort
setting CFLAGS to -fPIC -Wall   -O2  -DFORTRANUNDERSCORE -DHAVE_ROMIOCONF_H
setting USER_CFLAGS to 
setting USER_FFLAGS to 
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpi2-other/info/Makefile
config.status: creating mpi2-other/array/Makefile
config.status: creating test/Makefile
config.status: creating test/misc.c
config.status: creating test/large_file.c
config.status: creating test/runtests
config.status: creating test-internal/Makefile
config.status: creating util/romioinstall
config.status: creating include/mpio.h
config.status: creating include/mpiof.h
config.status: creating mpi2-other/info/fortran/Makefile
config.status: creating mpi2-other/array/fortran/Makefile
config.status: creating test/fmisc.f
config.status: creating test/fcoll_test.f
config.status: creating test/pfcoll_test.f
config.status: creating test/fperf.f
config.status: creating adio/include/romioconf.h
config.status: adio/include/romioconf.h is unchanged
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing default-1 commands
configure: ===== done with src/mpi/romio configure =====
configure: sourcing src/mpi/romio/localdefs
configure: ===== configuring src/pm/hydra =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST'  '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall   -O2' 'CC=clang' 'FC=flang' --cache-file=/dev/null --srcdir=.
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking target system type... amd64-unknown-freebsd12.0
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
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checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
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checking whether it is safe to define __EXTENSIONS__... yes
checking for fgrep... /usr/bin/grep -F
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... no
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checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of clang... gcc3
checking the archiver (ar) interface... ar
checking whether make supports nested variables... (cached) yes
checking for perl... /usr/local/bin/perl
checking for doctext... false
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checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking size of unsigned long... 8
checking for size_t... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
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checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for variable argument list macro functionality... yes
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
configure: ===== configuring mpl =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST' --disable-versioning --enable-embedded '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall   -O2 ' 'CC=clang' 'FC=flang' 'LDFLAGS=' 'LIBS=' 'CPPFLAGS=  -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpl/include -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpl/include -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/openpa/src -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/openpa/src -D_REENTRANT -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpi/romio/include' 'MPLLIBNAME=mpl' --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking dependency style of clang... gcc3
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
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checking whether it is safe to define __EXTENSIONS__... yes
checking the archiver (ar) interface... ar
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking if C compiler supports __builtin_expect... yes
checking for gcov... no
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
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checking for stdlib.h... (cached) yes
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checking stdarg.h usability... yes
checking stdarg.h presence... yes
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checking sys/mman.h presence... yes
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checking memcheck.h usability... no
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checking for gethrtime... no
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checking for gettimeofday... yes
checking for library containing clock_gettime... none required
checking for library containing clock_getres... none required
checking whether struct timespec is defined in time.h... yes
checking for CLOCK_REALTIME defined in time.h... yes
configure: Timer type selected is CLOCK_GETTIME
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for unistd.h... (cached) yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
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checking for sched_yield... yes
checking for yield... no
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checking whether usleep needs a declaration... no
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking for pthread_yield... yes
checking for pthread_key_create... yes
checking for pthread_cleanup_push... yes
configure: POSIX will be used for thread package.
checking for thread local storage specifier... _Thread_local
checking for pthread_mutex_init... yes
checking for pthread_mutexattr_setpshared... yes
configure: POSIX will be used for interprocess mutex package.
checking for mkstemp... yes
checking whether mkstemp needs a declaration... no
checking for fdopen... yes
checking whether fdopen needs a declaration... yes
checking for getpid... yes
checking for mmap... yes
checking for munmap... yes
configure: Using a memory-mapped file for shared memory
checking for strdup... yes
checking whether strdup needs a declaration... no
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checking whether snprintf needs a declaration... no
checking for strncmp... yes
checking whether strncmp needs a declaration... no
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checking whether putenv needs a declaration... no
checking for strerror... yes
checking whether strerror needs a declaration... no
checking for usleep... (cached) yes
checking whether usleep needs a declaration... (cached) no
checking for posix_memalign... yes
checking for aligned_alloc... yes
checking whether aligned_alloc needs a declaration... no
checking for backtrace_symbols... no
checking whether backtrace_create_state is declared... no
checking whether backtrace_print is declared... no
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
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checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
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checking for inet_ntop... yes
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checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for __attribute__((aligned))... yes
checking for __attribute__((fallthrough))... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/mpl_timer.h
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: ===== done with mpl configure =====
configure: sourcing mpl/localdefs
checking for doxygen... no
checking for gcov... no
checking for ANSI C header files... (cached) yes
checking for unistd.h... (cached) yes
checking for strings.h... (cached) yes
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checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
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checking sched.h usability... yes
checking sched.h presence... yes
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checking for sys/stat.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
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checking netinet/in.h usability... yes
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checking netinet/tcp.h usability... yes
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checking sys/un.h usability... yes
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checking sys/time.h usability... yes
checking sys/time.h presence... yes
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checking time.h usability... yes
checking time.h presence... yes
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checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
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checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
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checking poll.h usability... yes
checking poll.h presence... yes
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checking fcntl.h usability... yes
checking fcntl.h presence... yes
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checking netdb.h usability... yes
checking netdb.h presence... yes
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checking winsock2.h usability... no
checking winsock2.h presence... no
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checking windows.h usability... no
checking windows.h presence... no
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checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for library containing hstrerror... none required
checking for gettimeofday... yes
checking for time... yes
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checking for signal... yes
checking for usleep... yes
checking for alloca... no
checking for unsetenv... yes
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checking for stat... yes
checking for fcntl... yes
checking for alarm... yes
checking for isatty... yes
checking for inet_ntop... yes
checking for getpgid... yes
checking for setsid... yes
checking for killpg... yes
checking for hstrerror... yes
checking whether hstrerror needs a declaration... no
checking whether gettimeofday needs a declaration... no
checking whether getpgid needs a declaration... no
checking whether killpg needs a declaration... no
checking for environ in unistd.h... no
checking for manually declared extern environ... yes
checking bootstrap server... user,ssh,rsh,fork,slurm,ll,lsf,sge,pbs,cobalt,manual,persist
checking tm.h usability... no
checking tm.h presence... no
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checking for tm_init in -ltorque... no
checking process manager... pmiserv
checking user interface... mpich
checking desired processor topology libraries... hwloc
checking for pkg-config... /usr/local/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for X... no

###
### Configuring hwloc core
###
checking hwloc building mode... embedded
configure: hwloc builddir: /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/pm/hydra/tools/topo/hwloc/hwloc
configure: hwloc srcdir: /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/pm/hydra/tools/topo/hwloc/hwloc
checking for hwloc version... 2.0.1rc2-git
checking if want hwloc maintainer support... disabled (embedded mode)
checking for hwloc directory prefix... tools/topo/hwloc/hwloc/
checking for hwloc symbol prefix... hwloc_
checking for clang option to accept ISO C99... none needed
checking size of void *... 8
checking which OS support to include... FreeBSD
checking which CPU support to include... x86_64
checking size of unsigned long... (cached) 8
checking size of unsigned int... 4
checking for the C compiler vendor... gnu
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
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checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking if clang supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
configure: WARNING: "-fvisibility=hidden" has been added to the hwloc CFLAGS
checking whether the C compiler rejects function calls with too many arguments... yes
checking whether the C compiler rejects function calls with too few arguments... yes
checking for unistd.h... (cached) yes
checking dirent.h usability... yes
checking dirent.h presence... yes
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checking ctype.h usability... yes
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checking for strftime... yes
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checking sys/mman.h usability... yes
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checking for KAFFINITY... no
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checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... no
checking for PSAPI_WORKING_SET_EX_BLOCK... no
checking for PSAPI_WORKING_SET_EX_INFORMATION... no
checking for PROCESSOR_NUMBER... no
checking for main in -lgdi32... no
checking for PostQuitMessage in -luser32... no
checking for windows.h... (cached) no
checking sys/lgrp_user.h usability... no
checking sys/lgrp_user.h presence... no
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checking kstat.h usability... no
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checking whether fabsf is declared... yes
checking for fabsf in -lm... yes
checking picl.h usability... no
checking picl.h presence... no
checking for picl.h... no
checking whether _SC_NPROCESSORS_ONLN is declared... yes
checking whether _SC_NPROCESSORS_CONF is declared... yes
checking whether _SC_NPROC_ONLN is declared... no
checking whether _SC_NPROC_CONF is declared... no
checking whether _SC_PAGESIZE is declared... yes
checking whether _SC_PAGE_SIZE is declared... yes
checking whether _SC_LARGE_PAGESIZE is declared... no
checking mach/mach_host.h usability... no
checking mach/mach_host.h presence... no
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checking mach/mach_init.h usability... no
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checking for sys/param.h... (cached) yes
checking for sys/sysctl.h... yes
checking whether CTL_HW is declared... yes
checking whether HW_NCPU is declared... yes
checking whether strtoull is declared... yes
checking for ssize_t... yes
checking whether snprintf is declared... yes
checking whether strcasecmp is declared... yes
checking whether _strdup is declared... no
checking whether _putenv is declared... no
checking for sysctl... yes
checking for sysctlbyname... yes
checking whether getprogname is declared... yes
checking whether getexecname is declared... no
checking whether GetModuleFileName is declared... no
checking for program_invocation_name... no
checking for __progname... yes
checking for pthread_t... yes
checking whether sched_getcpu is declared... no
checking whether sched_setaffinity is declared... no
checking for working CPU_SET... no
checking for working CPU_SET_S... no
checking for working syscall with 6 parameters... yes
checking for lib... no
checking for bash... /usr/local/bin/bash
checking for ffs... yes
checking whether ffs is declared... yes
checking whether function ffs has a complete prototype... yes
checking for ffsl... yes
checking whether ffsl is declared... yes
checking whether function ffsl has a complete prototype... yes
checking for fls... yes
checking whether fls is declared... yes
checking whether function fls has a complete prototype... yes
checking for flsl... yes
checking whether flsl is declared... yes
checking whether function flsl has a complete prototype... yes
checking for clz... no
checking for clzl... no
checking for openat... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking for getpagesize... yes
checking for memalign... no
checking for posix_memalign... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for uname... yes
checking pthread_np.h usability... yes
checking pthread_np.h presence... yes
checking for pthread_np.h... yes
checking whether pthread_setaffinity_np is declared... yes
checking whether pthread_getaffinity_np is declared... yes
checking for sched_setaffinity... no
checking for sys/cpuset.h... yes
checking for cpuset_setaffinity... yes
checking for library containing pthread_getthrds_np... no
checking for cpuset_setid... yes
checking libudev.h usability... no
checking libudev.h presence... no
checking for libudev.h... no
checking for PCIACCESS... no
checking pciaccess.h usability... no
checking pciaccess.h presence... no
checking for pciaccess.h... no
checking CL/cl_ext.h usability... no
checking CL/cl_ext.h presence... no
checking for CL/cl_ext.h... no
checking cuda.h usability... no
checking cuda.h presence... no
checking for cuda.h... no
checking cuda_runtime_api.h usability... no
checking cuda_runtime_api.h presence... no
checking for cuda_runtime_api.h... no
checking nvml.h usability... no
checking nvml.h presence... no
checking for nvml.h... no
checking X11/Xlib.h usability... no
checking X11/Xlib.h presence... no
checking for X11/Xlib.h... no
configure: WARNING: X11 not found; GL disabled
checking NVCtrl/NVCtrl.h usability... no
checking NVCtrl/NVCtrl.h presence... no
checking for NVCtrl/NVCtrl.h... no
checking for LIBXML2... yes
checking libxml/parser.h usability... yes
checking libxml/parser.h presence... yes
checking for libxml/parser.h... yes
checking for xmlNewDoc... yes
checking for final LIBXML2 support... yes
checking for x86 cpuid... yes
checking for pthread_mutex_lock... yes
checking if plugin support is enabled... no
checking components to build statically...  noos xml synthetic xml_nolibxml freebsd xml_libxml x86
checking components to build as plugins... 
checking available processor topology libraries... hwloc
checking slurm/slurm.h usability... no
checking slurm/slurm.h presence... no
checking for slurm/slurm.h... no
checking for slurm_hostlist_create in -lslurm... no
checking whether POSIX compliant regcomp()/regexec()... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking checkpointing library... blcr
checking libcr.h usability... no
checking libcr.h presence... no
checking for libcr.h... no
checking for cr_init in -lcr... no
checking demux engine... poll,select,port
checking for poll... yes
checking for select... yes
checking debugging support... none
checking error checking... yes
checking warnings... no
checking profiling... yes
checking for strsignal... (cached) yes
checking whether strsignal needs a declaration... no
checking for sigaction... (cached) yes
checking for signal... (cached) yes
checking for sigset... yes
checking for struct sigaction and sa_handler... yes
checking for gethostname... yes
checking whether gethostname needs a declaration... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating tools/topo/hwloc/hwloc/Makefile
config.status: creating tools/topo/hwloc/hwloc/include/Makefile
config.status: creating tools/topo/hwloc/hwloc/hwloc/Makefile
config.status: creating Makefile
config.status: creating tools/bootstrap/src/bsci_init.c
config.status: creating hydra-doxygen.cfg
config.status: creating include/hydra_config.h
config.status: creating tools/topo/hwloc/hwloc/include/private/autogen/config.h
config.status: creating tools/topo/hwloc/hwloc/include/hwloc/autogen/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: ===== done with src/pm/hydra configure =====
checking size of OPA_ptr_t... 8
checking the sizeof MPI_Offset... 8
checking whether the Fortran Offset type works with Fortran 77... yes
checking whether the Fortran Offset type works with Fortran 90... yes
checking for size of MPI_Status... 20
checking for BSD/POSIX style global symbol lister... no
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for multiple __attribute__((alias)) support... yes
checking the minimum alignment of Fortran common block of 1 integers... 64
checking the minimum alignment of Fortran common block of 5 integers... 64
configure: WARNING: The ch3 device did not set the maximum size of an error string, 512 being used.
configure: creating ./config.lt
config.lt: creating libtool
checking whether C compiler accepts option "-qmkshrobj"... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating src/hwloc/Makefile
config.status: creating src/hwloc/include/Makefile
config.status: creating src/hwloc/hwloc/Makefile
config.status: creating src/binding/fortran/use_mpi/mpif90model.h
config.status: creating src/mpid/ch3/channels/nemesis/include/mpid_nem_net_module_defs.h
config.status: creating src/mpid/ch3/channels/nemesis/src/mpid_nem_net_array.c
config.status: creating Makefile
config.status: creating examples/Makefile
config.status: creating test/Makefile
config.status: creating test/commands/Makefile
config.status: creating src/include/mpichinfo.h
config.status: creating mpich-doxygen
config.status: creating src/include/mpir_ext.h
config.status: creating src/binding/cxx/mpicxx.h
config.status: creating src/binding/fortran/mpif_h/mpif.h
config.status: creating src/binding/fortran/mpif_h/setbotf.f
config.status: creating src/binding/fortran/mpif_h/setbot.c
config.status: creating src/binding/fortran/use_mpi/mpi_sizeofs.f90
config.status: creating src/binding/fortran/use_mpi/mpi_base.f90
config.status: creating src/binding/fortran/use_mpi/mpi_constants.f90
config.status: creating src/binding/fortran/use_mpi_f08/mpi_f08_compile_constants.f90
config.status: creating src/binding/fortran/use_mpi_f08/mpi_c_interface_types.f90
config.status: creating src/packaging/pkgconfig/mpich.pc
config.status: creating src/packaging/envmods/mpich.module
config.status: WARNING:  'src/packaging/envmods/mpich.module.in' seems to ignore the --datarootdir setting
config.status: creating src/env/mpixxx_opts.conf
config.status: creating src/env/mpicc.sh
config.status: creating src/env/mpicc.bash
config.status: creating src/env/mpicxx.sh
config.status: creating src/env/mpicxx.bash
config.status: creating src/env/mpif77.sh
config.status: creating src/env/mpif77.bash
config.status: creating src/env/mpifort.sh
config.status: creating src/env/mpifort.bash
config.status: creating src/env/parkill
config.status: creating src/include/mpi.h
config.status: creating doc/design/Makefile
config.status: creating doc/installguide/Makefile
config.status: creating doc/logging/Makefile
config.status: creating doc/refman/Makefile
config.status: creating doc/userguide/Makefile
config.status: creating test/commands/cmdtests
config.status: creating src/include/mpichconf.h
config.status: creating src/hwloc/include/private/autogen/config.h
config.status: src/hwloc/include/private/autogen/config.h is unchanged
config.status: creating src/hwloc/include/hwloc/autogen/config.h
config.status: src/hwloc/include/hwloc/autogen/config.h is unchanged
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
=== configuring in test/mpi (/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/test/mpi)
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST'  '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall' 'CC=clang' 'FC=flang' --cache-file=/dev/null --srcdir=.
RUNNING CONFIGURE FOR MPI TESTS
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking whether make supports nested variables... (cached) yes
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking whether make supports the include directive... yes (GNU style)
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking dependency style of clang... gcc3
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for ranlib... ranlib
checking the archiver (ar) interface... ar
checking for grep that handles long lines and -e... /usr/bin/grep
checking for fgrep... /usr/bin/grep -F
checking how to run the C preprocessor... clang -E
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking for int8_t... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking size of void *... 8
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for library containing pthread_create... -lpthread
checking for library containing pthread_barrier_init... none required
checking for pthread_create... yes
checking for pthread_yield... yes
checking for pthread_barrier_init... yes
checking for pthread_barrier_wait... yes
checking whether struct hostent contains h_addr_list... yes
checking for getrusage... yes
checking whether we are using the GNU Fortran 77 compiler... no
checking whether flang accepts -g... yes
checking whether integer*4 is supported... yes
checking whether integer*8 is supported... yes
checking whether integer*16 is supported... yes
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to get verbose linking output from flang... -v
checking for Fortran 77 libraries of flang...  -L/usr/local/flang/lib -L/usr/lib -lflangmain -lm -lflang -lflangrti -lomptarget -lompstub -lomp -lpgmath -lgomp -liomp5 -lmp -lexecinfo -lpthread
checking for Fortran 77 name mangling... lower uscore
checking whether flang allows mismatched arguments... yes
checking for Fortran libraries needed for getarg... none needed
checking whether Fortran 77 supports Cray-style pointer... yes
checking for Fortran 77 compiler flag for Cray-style pointer... none
checking whether we are using the GNU Fortran compiler... no
checking whether flang accepts -g... yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (flang  ) works... yes
checking whether the Fortran 90 compiler (flang  ) is a cross-compiler... no
checking for Fortran flag needed to accept free-form source... none
checking whether Fortran 90 supports Cray-style pointer... yes
checking for Fortran 90 compiler flag for Cray-style pointer... none
checking whether flang supports the Fortran 2003 routines to access the commandline... yes
checking for Fortran 90 module extension... mod
checking for Fortran 90 module include flag... -I
checking for Fortran 90 module output directory flag... -J
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking dependency style of clang++... gcc3
checking whether <iostream> available... yes
checking whether the compiler implements namespaces... yes
checking whether the compiler implements the namespace std... yes
checking whether MPI_2DOUBLE_COMPLEX is available... no
checking whether MPI_2COMPLEX is available... no
checking size of void *... (cached) 8
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of short... 2
checking for C integer type of address size... long
checking for perl... /usr/local/bin/perl
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating maint/testmerge
config.status: creating runtests
config.status: creating checktests
config.status: creating Makefile
config.status: creating basic/Makefile
config.status: creating attr/Makefile
config.status: creating attr/testlist
config.status: creating util/Makefile
config.status: creating coll/Makefile
config.status: creating coll/testlist
config.status: creating comm/Makefile
config.status: creating datatype/Makefile
config.status: creating datatype/testlist
config.status: creating errhan/Makefile
config.status: creating group/Makefile
config.status: creating info/Makefile
config.status: creating init/Makefile
config.status: creating pt2pt/Makefile
config.status: creating pt2pt/testlist
config.status: creating mpi_t/Makefile
config.status: creating rma/Makefile
config.status: creating rma/testlist
config.status: creating spawn/Makefile
config.status: creating spawn/testlist
config.status: creating topo/Makefile
config.status: creating io/Makefile
config.status: creating io/testlist
config.status: creating f77/Makefile
config.status: creating f77/attr/Makefile
config.status: creating f77/attr/attraints.h
config.status: creating f77/pt2pt/attr1aints.h
config.status: creating f77/ext/add1size.h
config.status: creating f77/datatype/Makefile
config.status: creating f77/datatype/typeaints.h
config.status: creating f77/util/Makefile
config.status: creating f77/coll/Makefile
config.status: creating f77/comm/Makefile
config.status: creating f77/topo/Makefile
config.status: creating f77/init/Makefile
config.status: creating f77/rma/addsize.h
config.status: creating f77/pt2pt/Makefile
config.status: creating f77/info/Makefile
config.status: creating f77/spawn/Makefile
config.status: creating f77/spawn/testlist
config.status: creating f77/spawn/type1aint.h
config.status: creating f77/rma/Makefile
config.status: creating f77/ext/Makefile
config.status: creating f77/ext/testlist
config.status: creating f77/io/Makefile
config.status: creating f77/io/iooffset.h
config.status: creating f77/io/iodisp.h
config.status: creating f77/io/ioaint.h
config.status: creating f77/io/testlist
config.status: creating f77/profile/Makefile
config.status: creating f90/Makefile
config.status: creating f90/attr/Makefile
config.status: creating f90/datatype/Makefile
config.status: creating f90/f90types/Makefile
config.status: creating f90/util/Makefile
config.status: creating f90/coll/Makefile
config.status: creating f90/comm/Makefile
config.status: creating f90/topo/Makefile
config.status: creating f90/init/Makefile
config.status: creating f90/pt2pt/Makefile
config.status: creating f90/rma/Makefile
config.status: creating f90/info/Makefile
config.status: creating f90/spawn/Makefile
config.status: creating f90/spawn/testlist
config.status: creating f90/timer/Makefile
config.status: creating f90/ext/Makefile
config.status: creating f90/ext/testlist
config.status: creating f90/io/Makefile
config.status: creating f90/io/testlist
config.status: creating f90/misc/Makefile
config.status: creating f90/profile/Makefile
config.status: creating f08/Makefile
config.status: creating f08/attr/Makefile
config.status: creating f08/datatype/Makefile
config.status: creating f08/util/Makefile
config.status: creating f08/coll/Makefile
config.status: creating f08/comm/Makefile
config.status: creating f08/pt2pt/Makefile
config.status: creating f08/rma/Makefile
config.status: creating f08/subarray/Makefile
config.status: creating f08/topo/Makefile
config.status: creating f08/io/Makefile
config.status: creating f08/io/testlist
config.status: creating f08/init/Makefile
config.status: creating f08/info/Makefile
config.status: creating f08/spawn/Makefile
config.status: creating f08/spawn/testlist
config.status: creating f08/timer/Makefile
config.status: creating f08/ext/Makefile
config.status: creating f08/misc/Makefile
config.status: creating f08/profile/Makefile
config.status: creating cxx/Makefile
config.status: creating cxx/util/Makefile
config.status: creating cxx/attr/Makefile
config.status: creating cxx/attr/testlist
config.status: creating cxx/pt2pt/Makefile
config.status: creating cxx/comm/Makefile
config.status: creating cxx/coll/Makefile
config.status: creating cxx/errhan/Makefile
config.status: creating cxx/info/Makefile
config.status: creating cxx/datatype/Makefile
config.status: creating cxx/datatype/testlist
config.status: creating cxx/io/Makefile
config.status: creating cxx/init/Makefile
config.status: creating cxx/rma/Makefile
config.status: creating cxx/spawn/Makefile
config.status: creating cxx/spawn/testlist
config.status: creating cxx/topo/Makefile
config.status: creating threads/Makefile
config.status: creating threads/pt2pt/Makefile
config.status: creating threads/util/Makefile
config.status: creating threads/comm/Makefile
config.status: creating threads/comm/testlist
config.status: creating threads/init/Makefile
config.status: creating threads/mpi_t/Makefile
config.status: creating threads/spawn/Makefile
config.status: creating threads/rma/Makefile
config.status: creating threads/coll/Makefile
config.status: creating threads/coll/testlist
config.status: creating errors/Makefile
config.status: creating errors/attr/Makefile
config.status: creating errors/basic/Makefile
config.status: creating errors/coll/Makefile
config.status: creating errors/comm/Makefile
config.status: creating errors/datatype/Makefile
config.status: creating errors/faults/Makefile
config.status: creating errors/group/Makefile
config.status: creating errors/pt2pt/Makefile
config.status: creating errors/rma/Makefile
config.status: creating errors/spawn/Makefile
config.status: creating errors/spawn/testlist
config.status: creating errors/topo/Makefile
config.status: creating errors/io/Makefile
config.status: creating errors/cxx/Makefile
config.status: creating errors/cxx/errhan/Makefile
config.status: creating errors/cxx/io/Makefile
config.status: creating errors/f77/Makefile
config.status: creating errors/f77/io/Makefile
config.status: creating errors/f77/io/addsize.h
config.status: creating errors/f77/io/iooffset.h
config.status: creating errors/f90/Makefile
config.status: creating errors/f90/io/Makefile
config.status: creating errors/f08/Makefile
config.status: creating errors/f08/io/Makefile
config.status: creating ckpoint/Makefile
config.status: creating ft/Makefile
config.status: creating manual/Makefile
config.status: creating manual/manyconnect
config.status: creating manual/mpi_t/Makefile
config.status: creating perf/Makefile
config.status: creating testlist
config.status: creating cxx/testlist
config.status: creating cxx/topo/testlist
config.status: creating f77/testlist
config.status: creating f90/testlist
config.status: creating f08/testlist
config.status: creating threads/testlist
config.status: creating errors/testlist
config.status: creating errors/cxx/testlist
config.status: creating errors/f77/testlist
config.status: creating errors/f90/testlist
config.status: creating impls/testlist
config.status: creating f77/rma/testlist
config.status: creating f90/rma/testlist
config.status: creating f08/rma/testlist
config.status: creating impls/Makefile
config.status: creating impls/hydra/Makefile
config.status: creating impls/hydra/proc_binding.sh
config.status: creating impls/mpich/Makefile
config.status: creating impls/mpich/testlist
config.status: creating impls/mpich/mpi_t/Makefile
config.status: creating include/mpitestconf.h
config.status: include/mpitestconf.h is unchanged
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
=== configuring in dtpools (/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/test/mpi/dtpools)
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local/TEST'  '--enable-static=no' '--enable-shared=yes' 'pac_c_check_compiler_option_prototest=no' '--enable-sharedlibs=libtool' 'CFLAGS=-fPIC -Wall' 'CC=clang' 'FC=flang' 'master_top_builddir=/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b' 'master_top_srcdir=/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b' 'FROM_MPICH=yes' 'MPICH_THREAD_LEVEL=MPI_THREAD_MULTIPLE' 'MPICH_ENABLE_F77=yes' 'MPICH_ENABLE_FC=yes' 'MPICH_ENABLE_CXX=yes' 'MPI_NO_SPAWN=' 'MPI_NO_RMA=' 'WRAPPER_CFLAGS=-fPIC -Wall' 'WRAPPER_CPPFLAGS=' 'WRAPPER_LDFLAGS=' 'WRAPPER_LIBS=-lm  -L/usr/local/lib -lxml2   -lpthread  ' 'WRAPPER_FFLAGS=' 'WRAPPER_FCFLAGS=' 'WRAPPER_CXXFLAGS=' 'LDFLAGS=' 'LIBS=' 'CPPFLAGS=  -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpl/include -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpl/include -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/openpa/src -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/openpa/src -D_REENTRANT -I/wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/mpi/romio/include' 'F77=flang' 'FFLAGS=  -O2' 'MPI_SIZEOF_AINT=8' 'MPI_SIZEOF_OFFSET=8' 'FCFLAGS=  -O2' 'CXX=clang++' 'CXXFLAGS=  -O2' --cache-file=/dev/null --srcdir=.
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking for gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking whether clang understands -c and -o together... yes
checking how to run the C preprocessor... clang -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of clang... gcc3
checking whether make supports nested variables... (cached) yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking the archiver (ar) interface... ar
checking build system type... amd64-unknown-freebsd12.0
checking host system type... amd64-unknown-freebsd12.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B
checking the name lister (/usr/local/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking how to convert amd64-unknown-freebsd12.0 file names to amd64-unknown-freebsd12.0 format... func_convert_file_noop
checking how to convert amd64-unknown-freebsd12.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/local/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd12.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
./configure: types+=MPI_CHAR,: not found
./configure: types+=MPI_BYTE,: not found
./configure: types+=MPI_WCHAR,: not found
./configure: types+=MPI_SHORT,: not found
./configure: types+=MPI_INT,: not found
./configure: types+=MPI_LONG,: not found
./configure: types+=MPI_LONG_LONG_INT,: not found
./configure: types+=MPI_UNSIGNED_CHAR,: not found
./configure: types+=MPI_UNSIGNED_SHORT,: not found
./configure: types+=MPI_UNSIGNED,: not found
./configure: types+=MPI_UNSIGNED_LONG,: not found
./configure: types+=MPI_UNSIGNED_LONG_LONG,: not found
./configure: types+=MPI_FLOAT,: not found
./configure: types+=MPI_DOUBLE,: not found
./configure: types+=MPI_LONG_DOUBLE,: not found
./configure: types+=MPI_INT8_T,: not found
./configure: types+=MPI_INT16_T,: not found
./configure: types+=MPI_INT32_T,: not found
./configure: types+=MPI_INT64_T,: not found
./configure: types+=MPI_UINT8_T,: not found
./configure: types+=MPI_UINT16_T,: not found
./configure: types+=MPI_UINT32_T,: not found
./configure: types+=MPI_UINT64_T,: not found
./configure: types+=MPI_C_COMPLEX,: not found
./configure: types+=MPI_C_FLOAT_COMPLEX,: not found
./configure: types+=MPI_C_DOUBLE_COMPLEX,: not found
./configure: types+=MPI_C_LONG_DOUBLE_COMPLEX,: not found
./configure: types+=MPI_FLOAT_INT,: not found
./configure: types+=MPI_DOUBLE_INT,: not found
./configure: types+=MPI_LONG_INT,: not found
./configure: types+=MPI_2INT,: not found
./configure: types+=MPI_SHORT_INT,: not found
./configure: types+=MPI_LONG_DOUBLE_INT,: not found
./configure: types+=MPI_DATATYPE_NULL: not found
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for stdint.h... (cached) yes
checking for sys/types.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for memset... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating include/Makefile
config.status: creating src/Makefile
config.status: creating dtpoolsconf.h
config.status: dtpoolsconf.h is unchanged
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration completed.

make command, output truncated to fit, full: https://pastebin.com/KUdg2Eg0

4 warnings generated.
  CC       src/mpi_t/lib_libmpi_la-mpit.lo
In file included from src/mpi_t/mpit.c:7:
In file included from ./src/include/mpiimpl.h:236:
In file included from ./src/mpid/ch3/include/mpidpost.h:10:
./src/mpid/ch3/include/mpid_coll.h:30:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:50:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:72:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:95:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
4 warnings generated.
  CC       src/nameserv/pmi/lib_libmpi_la-pmi_nameserv.lo
In file included from src/nameserv/pmi/pmi_nameserv.c:11:
In file included from ./src/include/mpiimpl.h:236:
In file included from ./src/mpid/ch3/include/mpidpost.h:10:
./src/mpid/ch3/include/mpid_coll.h:30:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:50:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:72:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
./src/mpid/ch3/include/mpid_coll.h:95:3: warning: unused label 'fn_exit' [-Wunused-label]
  fn_exit:
  ^~~~~~~~
4 warnings generated.
  CC       src/pmi/simple/lib_libmpi_la-simple_pmiutil.lo
  CC       src/pmi/simple/lib_libmpi_la-simple_pmi.lo
  GEN      lib/libmpi.la
clang-6.0: error: unsupported option '--whole-archive'
clang-6.0: error: unsupported option '--no-whole-archive'
clang-6.0: error: unknown argument: '-soname'
clang-6.0: error: no such file or directory: 'libmpi.so.0'
*** Error code 1

Stop.
make[2]: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b
*** Error code 1

Stop.
make: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b

verbose make command, again truncated, full: https://pastebin.com/UQDGWLyf

libtool: link: flang -shared   src/mpi/attr/.libs/lib_libmpi_la-attr_delete.o src/mpi/attr/.libs/lib_libmpi_la-attr_get.o src/mpi/attr/.libs/lib_libmpi_la-attr_put.o src/mpi/attr/.libs/lib_libmpi_la-comm_create_keyval.o src/mpi/attr/.libs/lib_libmpi_la-comm_delete_attr.o src/mpi/attr/.libs/lib_libmpi_la-comm_free_keyval.o src/mpi/attr/.libs/lib_libmpi_la-comm_get_attr.o src/mpi/attr/.libs/lib_libmpi_la-comm_set_attr.o src/mpi/attr/.libs/lib_libmpi_la-keyval_create.o src/mpi/attr/.libs/lib_libmpi_la-keyval_free.o src/mpi/attr/.libs/lib_libmpi_la-type_create_keyval.o src/mpi/attr/.libs/lib_libmpi_la-type_delete_attr.o src/mpi/attr/.libs/lib_libmpi_la-type_free_keyval.o src/mpi/attr/.libs/lib_libmpi_la-type_get_attr.o src/mpi/attr/.libs/lib_libmpi_la-type_set_attr.o src/mpi/attr/.libs/lib_libmpi_la-win_create_keyval.o src/mpi/attr/.libs/lib_libmpi_la-win_delete_attr.o src/mpi/attr/.libs/lib_libmpi_la-win_free_keyval.o src/mpi/attr/.libs/lib_libmpi_la-win_get_attr.o src/mpi/attr/.libs/lib_libmpi_la-win_set_attr.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall.o src/mpi/coll/alltoallv/.libs/lib_libmpi_la-alltoallv.o src/mpi/coll/alltoallw/.libs/lib_libmpi_la-alltoallw.o src/mpi/coll/barrier/.libs/lib_libmpi_la-barrier.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast.o src/mpi/coll/exscan/.libs/lib_libmpi_la-exscan.o src/mpi/coll/gather/.libs/lib_libmpi_la-gather.o src/mpi/coll/gatherv/.libs/lib_libmpi_la-gatherv.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce.o src/mpi/coll/scan/.libs/lib_libmpi_la-scan.o src/mpi/coll/scatter/.libs/lib_libmpi_la-scatter.o src/mpi/coll/scatterv/.libs/lib_libmpi_la-scatterv.o src/mpi/coll/neighbor_allgather/.libs/lib_libmpi_la-neighbor_allgather.o src/mpi/coll/neighbor_allgatherv/.libs/lib_libmpi_la-neighbor_allgatherv.o src/mpi/coll/neighbor_alltoall/.libs/lib_libmpi_la-neighbor_alltoall.o src/mpi/coll/neighbor_alltoallv/.libs/lib_libmpi_la-neighbor_alltoallv.o src/mpi/coll/neighbor_alltoallw/.libs/lib_libmpi_la-neighbor_alltoallw.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall.o src/mpi/coll/ialltoallv/.libs/lib_libmpi_la-ialltoallv.o src/mpi/coll/ialltoallw/.libs/lib_libmpi_la-ialltoallw.o src/mpi/coll/ibarrier/.libs/lib_libmpi_la-ibarrier.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast.o src/mpi/coll/iexscan/.libs/lib_libmpi_la-iexscan.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather.o src/mpi/coll/igatherv/.libs/lib_libmpi_la-igatherv.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce.o src/mpi/coll/iscan/.libs/lib_libmpi_la-iscan.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter.o src/mpi/coll/iscatterv/.libs/lib_libmpi_la-iscatterv.o src/mpi/coll/ineighbor_allgather/.libs/lib_libmpi_la-ineighbor_allgather.o src/mpi/coll/ineighbor_allgatherv/.libs/lib_libmpi_la-ineighbor_allgatherv.o src/mpi/coll/ineighbor_alltoall/.libs/lib_libmpi_la-ineighbor_alltoall.o src/mpi/coll/ineighbor_alltoallv/.libs/lib_libmpi_la-ineighbor_alltoallv.o src/mpi/coll/ineighbor_alltoallw/.libs/lib_libmpi_la-ineighbor_alltoallw.o src/mpi/coll/op/.libs/lib_libmpi_la-op_create.o src/mpi/coll/op/.libs/lib_libmpi_la-op_free.o src/mpi/coll/op/.libs/lib_libmpi_la-op_commutative.o src/mpi/coll/reduce_local/.libs/lib_libmpi_la-reduce_local.o src/mpi/comm/.libs/lib_libmpi_la-comm_compare.o src/mpi/comm/.libs/lib_libmpi_la-comm_create.o src/mpi/comm/.libs/lib_libmpi_la-comm_create_group.o src/mpi/comm/.libs/lib_libmpi_la-comm_dup.o src/mpi/comm/.libs/lib_libmpi_la-comm_dup_with_info.o src/mpi/comm/.libs/lib_libmpi_la-comm_free.o src/mpi/comm/.libs/lib_libmpi_la-comm_get_name.o src/mpi/comm/.libs/lib_libmpi_la-comm_get_info.o src/mpi/comm/.libs/lib_libmpi_la-comm_set_info.o src/mpi/comm/.libs/lib_libmpi_la-comm_group.o src/mpi/comm/.libs/lib_libmpi_la-comm_idup.o src/mpi/comm/.libs/lib_libmpi_la-comm_rank.o src/mpi/comm/.libs/lib_libmpi_la-comm_size.o src/mpi/comm/.libs/lib_libmpi_la-comm_remote_group.o src/mpi/comm/.libs/lib_libmpi_la-comm_remote_size.o src/mpi/comm/.libs/lib_libmpi_la-comm_set_name.o src/mpi/comm/.libs/lib_libmpi_la-comm_split.o src/mpi/comm/.libs/lib_libmpi_la-comm_test_inter.o src/mpi/comm/.libs/lib_libmpi_la-intercomm_create.o src/mpi/comm/.libs/lib_libmpi_la-intercomm_merge.o src/mpi/comm/.libs/lib_libmpi_la-comm_split_type.o src/mpi/comm/.libs/lib_libmpi_la-comm_failure_ack.o src/mpi/comm/.libs/lib_libmpi_la-comm_failure_get_acked.o src/mpi/comm/.libs/lib_libmpi_la-comm_revoke.o src/mpi/comm/.libs/lib_libmpi_la-comm_shrink.o src/mpi/comm/.libs/lib_libmpi_la-comm_agree.o src/mpi/datatype/.libs/lib_libmpi_la-address.o src/mpi/datatype/.libs/lib_libmpi_la-get_address.o src/mpi/datatype/.libs/lib_libmpi_la-get_count.o src/mpi/datatype/.libs/lib_libmpi_la-get_elements.o src/mpi/datatype/.libs/lib_libmpi_la-get_elements_x.o src/mpi/datatype/.libs/lib_libmpi_la-pack.o src/mpi/datatype/.libs/lib_libmpi_la-pack_external.o src/mpi/datatype/.libs/lib_libmpi_la-pack_external_size.o src/mpi/datatype/.libs/lib_libmpi_la-pack_size.o src/mpi/datatype/.libs/lib_libmpi_la-status_set_elements.o src/mpi/datatype/.libs/lib_libmpi_la-status_set_elements_x.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_name.o src/mpi/datatype/.libs/lib_libmpi_la-type_set_name.o src/mpi/datatype/.libs/lib_libmpi_la-type_size.o src/mpi/datatype/.libs/lib_libmpi_la-type_size_x.o src/mpi/datatype/.libs/lib_libmpi_la-type_extent.o src/mpi/datatype/.libs/lib_libmpi_la-type_vector.o src/mpi/datatype/.libs/lib_libmpi_la-type_commit.o src/mpi/datatype/.libs/lib_libmpi_la-type_indexed.o src/mpi/datatype/.libs/lib_libmpi_la-type_hindexed.o src/mpi/datatype/.libs/lib_libmpi_la-type_struct.o src/mpi/datatype/.libs/lib_libmpi_la-type_contiguous.o src/mpi/datatype/.libs/lib_libmpi_la-type_free.o src/mpi/datatype/.libs/lib_libmpi_la-type_hvector.o src/mpi/datatype/.libs/lib_libmpi_la-type_dup.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_envelope.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_contents.o src/mpi/datatype/.libs/lib_libmpi_la-type_ub.o src/mpi/datatype/.libs/lib_libmpi_la-type_lb.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_extent.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_extent_x.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_true_extent.o src/mpi/datatype/.libs/lib_libmpi_la-type_get_true_extent_x.o src/mpi/datatype/.libs/lib_libmpi_la-type_match_size.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_struct.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_hindexed.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_hvector.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_indexed_block.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_hindexed_block.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_resized.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_darray.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_subarray.o src/mpi/datatype/.libs/lib_libmpi_la-unpack.o src/mpi/datatype/.libs/lib_libmpi_la-unpack_external.o src/mpi/errhan/.libs/lib_libmpi_la-add_error_code.o src/mpi/errhan/.libs/lib_libmpi_la-add_error_class.o src/mpi/errhan/.libs/lib_libmpi_la-add_error_string.o src/mpi/errhan/.libs/lib_libmpi_la-comm_call_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-comm_create_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-comm_get_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-comm_set_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-errhandler_create.o src/mpi/errhan/.libs/lib_libmpi_la-errhandler_free.o src/mpi/errhan/.libs/lib_libmpi_la-errhandler_get.o src/mpi/errhan/.libs/lib_libmpi_la-errhandler_set.o src/mpi/errhan/.libs/lib_libmpi_la-error_class.o src/mpi/errhan/.libs/lib_libmpi_la-error_string.o src/mpi/errhan/.libs/lib_libmpi_la-file_create_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-file_get_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-file_set_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-file_call_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-win_create_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-win_call_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-win_get_errhandler.o src/mpi/errhan/.libs/lib_libmpi_la-win_set_errhandler.o src/mpi/group/.libs/lib_libmpi_la-group_compare.o src/mpi/group/.libs/lib_libmpi_la-group_difference.o src/mpi/group/.libs/lib_libmpi_la-group_excl.o src/mpi/group/.libs/lib_libmpi_la-group_free.o src/mpi/group/.libs/lib_libmpi_la-group_incl.o src/mpi/group/.libs/lib_libmpi_la-group_intersection.o src/mpi/group/.libs/lib_libmpi_la-group_range_excl.o src/mpi/group/.libs/lib_libmpi_la-group_range_incl.o src/mpi/group/.libs/lib_libmpi_la-group_rank.o src/mpi/group/.libs/lib_libmpi_la-group_size.o src/mpi/group/.libs/lib_libmpi_la-group_translate_ranks.o src/mpi/group/.libs/lib_libmpi_la-group_union.o src/mpi/info/.libs/lib_libmpi_la-info_create.o src/mpi/info/.libs/lib_libmpi_la-info_delete.o src/mpi/info/.libs/lib_libmpi_la-info_dup.o src/mpi/info/.libs/lib_libmpi_la-info_free.o src/mpi/info/.libs/lib_libmpi_la-info_get.o src/mpi/info/.libs/lib_libmpi_la-info_getn.o src/mpi/info/.libs/lib_libmpi_la-info_getnth.o src/mpi/info/.libs/lib_libmpi_la-info_getvallen.o src/mpi/info/.libs/lib_libmpi_la-info_set.o src/mpi/init/.libs/lib_libmpi_la-abort.o src/mpi/init/.libs/lib_libmpi_la-init.o src/mpi/init/.libs/lib_libmpi_la-initialized.o src/mpi/init/.libs/lib_libmpi_la-initthread.o src/mpi/init/.libs/lib_libmpi_la-ismain.o src/mpi/init/.libs/lib_libmpi_la-finalize.o src/mpi/init/.libs/lib_libmpi_la-finalized.o src/mpi/init/.libs/lib_libmpi_la-querythread.o src/mpi/misc/.libs/lib_libmpi_la-getpname.o src/mpi/misc/.libs/lib_libmpi_la-pcontrol.o src/mpi/misc/.libs/lib_libmpi_la-version.o src/mpi/misc/.libs/lib_libmpi_la-library_version.o src/mpi/misc/.libs/lib_libmpi_la-aint_add.o src/mpi/misc/.libs/lib_libmpi_la-aint_diff.o src/mpi/misc/.libs/lib_libmpi_la-utils.o src/mpi/pt2pt/.libs/lib_libmpi_la-bsend.o src/mpi/pt2pt/.libs/lib_libmpi_la-bsend_init.o src/mpi/pt2pt/.libs/lib_libmpi_la-bufattach.o src/mpi/pt2pt/.libs/lib_libmpi_la-buffree.o src/mpi/pt2pt/.libs/lib_libmpi_la-ibsend.o src/mpi/pt2pt/.libs/lib_libmpi_la-improbe.o src/mpi/pt2pt/.libs/lib_libmpi_la-imrecv.o src/mpi/pt2pt/.libs/lib_libmpi_la-iprobe.o src/mpi/pt2pt/.libs/lib_libmpi_la-irecv.o src/mpi/pt2pt/.libs/lib_libmpi_la-irsend.o src/mpi/pt2pt/.libs/lib_libmpi_la-isend.o src/mpi/pt2pt/.libs/lib_libmpi_la-issend.o src/mpi/pt2pt/.libs/lib_libmpi_la-mprobe.o src/mpi/pt2pt/.libs/lib_libmpi_la-mrecv.o src/mpi/pt2pt/.libs/lib_libmpi_la-probe.o src/mpi/pt2pt/.libs/lib_libmpi_la-recv.o src/mpi/pt2pt/.libs/lib_libmpi_la-recv_init.o src/mpi/pt2pt/.libs/lib_libmpi_la-rsend.o src/mpi/pt2pt/.libs/lib_libmpi_la-rsend_init.o src/mpi/pt2pt/.libs/lib_libmpi_la-send.o src/mpi/pt2pt/.libs/lib_libmpi_la-send_init.o src/mpi/pt2pt/.libs/lib_libmpi_la-sendrecv.o src/mpi/pt2pt/.libs/lib_libmpi_la-sendrecv_rep.o src/mpi/pt2pt/.libs/lib_libmpi_la-ssend.o src/mpi/pt2pt/.libs/lib_libmpi_la-ssend_init.o src/mpi/request/.libs/lib_libmpi_la-cancel.o src/mpi/request/.libs/lib_libmpi_la-greq_start.o src/mpi/request/.libs/lib_libmpi_la-greq_complete.o src/mpi/request/.libs/lib_libmpi_la-request_free.o src/mpi/request/.libs/lib_libmpi_la-request_get_status.o src/mpi/request/.libs/lib_libmpi_la-status_set_cancelled.o src/mpi/request/.libs/lib_libmpi_la-start.o src/mpi/request/.libs/lib_libmpi_la-startall.o src/mpi/request/.libs/lib_libmpi_la-test.o src/mpi/request/.libs/lib_libmpi_la-test_cancelled.o src/mpi/request/.libs/lib_libmpi_la-testall.o src/mpi/request/.libs/lib_libmpi_la-testany.o src/mpi/request/.libs/lib_libmpi_la-testsome.o src/mpi/request/.libs/lib_libmpi_la-wait.o src/mpi/request/.libs/lib_libmpi_la-waitall.o src/mpi/request/.libs/lib_libmpi_la-waitany.o src/mpi/request/.libs/lib_libmpi_la-waitsome.o src/mpi/rma/.libs/lib_libmpi_la-accumulate.o src/mpi/rma/.libs/lib_libmpi_la-alloc_mem.o src/mpi/rma/.libs/lib_libmpi_la-compare_and_swap.o src/mpi/rma/.libs/lib_libmpi_la-fetch_and_op.o src/mpi/rma/.libs/lib_libmpi_la-free_mem.o src/mpi/rma/.libs/lib_libmpi_la-get.o src/mpi/rma/.libs/lib_libmpi_la-get_accumulate.o src/mpi/rma/.libs/lib_libmpi_la-put.o src/mpi/rma/.libs/lib_libmpi_la-raccumulate.o src/mpi/rma/.libs/lib_libmpi_la-rget.o src/mpi/rma/.libs/lib_libmpi_la-rget_accumulate.o src/mpi/rma/.libs/lib_libmpi_la-rput.o src/mpi/rma/.libs/lib_libmpi_la-win_allocate.o src/mpi/rma/.libs/lib_libmpi_la-win_allocate_shared.o src/mpi/rma/.libs/lib_libmpi_la-win_attach.o src/mpi/rma/.libs/lib_libmpi_la-win_complete.o src/mpi/rma/.libs/lib_libmpi_la-win_create.o src/mpi/rma/.libs/lib_libmpi_la-win_create_dynamic.o src/mpi/rma/.libs/lib_libmpi_la-win_detach.o src/mpi/rma/.libs/lib_libmpi_la-win_fence.o src/mpi/rma/.libs/lib_libmpi_la-win_flush.o src/mpi/rma/.libs/lib_libmpi_la-win_flush_all.o src/mpi/rma/.libs/lib_libmpi_la-win_flush_local.o src/mpi/rma/.libs/lib_libmpi_la-win_flush_local_all.o src/mpi/rma/.libs/lib_libmpi_la-win_free.o src/mpi/rma/.libs/lib_libmpi_la-win_get_group.o src/mpi/rma/.libs/lib_libmpi_la-win_get_info.o src/mpi/rma/.libs/lib_libmpi_la-win_get_name.o src/mpi/rma/.libs/lib_libmpi_la-win_lock.o src/mpi/rma/.libs/lib_libmpi_la-win_lock_all.o src/mpi/rma/.libs/lib_libmpi_la-win_post.o src/mpi/rma/.libs/lib_libmpi_la-win_set_info.o src/mpi/rma/.libs/lib_libmpi_la-win_set_name.o src/mpi/rma/.libs/lib_libmpi_la-win_shared_query.o src/mpi/rma/.libs/lib_libmpi_la-win_start.o src/mpi/rma/.libs/lib_libmpi_la-win_sync.o src/mpi/rma/.libs/lib_libmpi_la-win_test.o src/mpi/rma/.libs/lib_libmpi_la-win_unlock.o src/mpi/rma/.libs/lib_libmpi_la-win_unlock_all.o src/mpi/rma/.libs/lib_libmpi_la-win_wait.o src/mpi/spawn/.libs/lib_libmpi_la-comm_disconnect.o src/mpi/spawn/.libs/lib_libmpi_la-comm_get_parent.o src/mpi/spawn/.libs/lib_libmpi_la-comm_join.o src/mpi/spawn/.libs/lib_libmpi_la-comm_spawn.o src/mpi/spawn/.libs/lib_libmpi_la-comm_spawn_multiple.o src/mpi/spawn/.libs/lib_libmpi_la-lookup_name.o src/mpi/spawn/.libs/lib_libmpi_la-publish_name.o src/mpi/spawn/.libs/lib_libmpi_la-unpublish_name.o src/mpi/spawn/.libs/lib_libmpi_la-open_port.o src/mpi/spawn/.libs/lib_libmpi_la-close_port.o src/mpi/spawn/.libs/lib_libmpi_la-comm_connect.o src/mpi/spawn/.libs/lib_libmpi_la-comm_accept.o src/mpi/timer/.libs/lib_libmpi_la-wtime.o src/mpi/timer/.libs/lib_libmpi_la-wtick.o src/mpi/topo/.libs/lib_libmpi_la-cart_coords.o src/mpi/topo/.libs/lib_libmpi_la-cart_create.o src/mpi/topo/.libs/lib_libmpi_la-cart_get.o src/mpi/topo/.libs/lib_libmpi_la-cart_map.o src/mpi/topo/.libs/lib_libmpi_la-cart_rank.o src/mpi/topo/.libs/lib_libmpi_la-cart_shift.o src/mpi/topo/.libs/lib_libmpi_la-cart_sub.o src/mpi/topo/.libs/lib_libmpi_la-dims_create.o src/mpi/topo/.libs/lib_libmpi_la-graph_get.o src/mpi/topo/.libs/lib_libmpi_la-graph_map.o src/mpi/topo/.libs/lib_libmpi_la-graph_nbr.o src/mpi/topo/.libs/lib_libmpi_la-graphcreate.o src/mpi/topo/.libs/lib_libmpi_la-graphdimsget.o src/mpi/topo/.libs/lib_libmpi_la-graphnbrcnt.o src/mpi/topo/.libs/lib_libmpi_la-cartdim_get.o src/mpi/topo/.libs/lib_libmpi_la-topo_test.o src/mpi/topo/.libs/lib_libmpi_la-dist_gr_create_adj.o src/mpi/topo/.libs/lib_libmpi_la-dist_gr_create.o src/mpi/topo/.libs/lib_libmpi_la-dist_gr_neighb_count.o src/mpi/topo/.libs/lib_libmpi_la-dist_gr_neighb.o src/binding/fortran/mpif_h/.libs/lib_libmpi_la-statusf2c.o src/binding/fortran/mpif_h/.libs/lib_libmpi_la-statusc2f.o src/binding/fortran/use_mpi/.libs/lib_libmpi_la-create_f90_int.o src/binding/fortran/use_mpi/.libs/lib_libmpi_la-create_f90_real.o src/binding/fortran/use_mpi/.libs/lib_libmpi_la-create_f90_complex.o src/glue/romio/.libs/lib_libmpi_la-all_romio_symbols.o src/mutex/.libs/lib_libmpi_la-mutex_create.o src/mutex/.libs/lib_libmpi_la-mutex_free.o src/mutex/.libs/lib_libmpi_la-mutex_lock.o src/mutex/.libs/lib_libmpi_la-mutex_unlock.o src/mpi_t/.libs/lib_libmpi_la-cat_changed.o src/mpi_t/.libs/lib_libmpi_la-cat_get_categories.o src/mpi_t/.libs/lib_libmpi_la-cat_get_cvars.o src/mpi_t/.libs/lib_libmpi_la-cat_get_info.o src/mpi_t/.libs/lib_libmpi_la-cat_get_num.o src/mpi_t/.libs/lib_libmpi_la-cat_get_pvars.o src/mpi_t/.libs/lib_libmpi_la-cvar_get_info.o src/mpi_t/.libs/lib_libmpi_la-cvar_get_num.o src/mpi_t/.libs/lib_libmpi_la-cvar_handle_alloc.o src/mpi_t/.libs/lib_libmpi_la-cvar_handle_free.o src/mpi_t/.libs/lib_libmpi_la-cvar_read.o src/mpi_t/.libs/lib_libmpi_la-cvar_write.o src/mpi_t/.libs/lib_libmpi_la-enum_get_info.o src/mpi_t/.libs/lib_libmpi_la-enum_get_item.o src/mpi_t/.libs/lib_libmpi_la-mpit_finalize.o src/mpi_t/.libs/lib_libmpi_la-mpit_initthread.o src/mpi_t/.libs/lib_libmpi_la-pvar_get_info.o src/mpi_t/.libs/lib_libmpi_la-pvar_get_num.o src/mpi_t/.libs/lib_libmpi_la-pvar_handle_alloc.o src/mpi_t/.libs/lib_libmpi_la-pvar_handle_free.o src/mpi_t/.libs/lib_libmpi_la-pvar_read.o src/mpi_t/.libs/lib_libmpi_la-pvar_readreset.o src/mpi_t/.libs/lib_libmpi_la-pvar_reset.o src/mpi_t/.libs/lib_libmpi_la-pvar_session_create.o src/mpi_t/.libs/lib_libmpi_la-pvar_session_free.o src/mpi_t/.libs/lib_libmpi_la-pvar_start.o src/mpi_t/.libs/lib_libmpi_la-pvar_stop.o src/mpi_t/.libs/lib_libmpi_la-pvar_write.o src/mpi_t/.libs/lib_libmpi_la-cat_get_index.o src/mpi_t/.libs/lib_libmpi_la-cvar_get_index.o src/mpi_t/.libs/lib_libmpi_la-pvar_get_index.o src/mpi/attr/.libs/lib_libmpi_la-attrutil.o src/mpi/attr/.libs/lib_libmpi_la-dup_fn.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather_allcomm_nb.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather_intra_recursive_doubling.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather_intra_brucks.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather_intra_ring.o src/mpi/coll/allgather/.libs/lib_libmpi_la-allgather_inter_local_gather_remote_bcast.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv_allcomm_nb.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv_intra_recursive_doubling.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv_intra_brucks.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv_intra_ring.o src/mpi/coll/allgatherv/.libs/lib_libmpi_la-allgatherv_inter_remote_gather_local_bcast.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce_allcomm_nb.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce_intra_recursive_doubling.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce_intra_reduce_scatter_allgather.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce_intra_smp.o src/mpi/coll/allreduce/.libs/lib_libmpi_la-allreduce_inter_reduce_exchange_bcast.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_allcomm_nb.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_intra_pairwise_sendrecv_replace.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_intra_brucks.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_intra_scattered.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_intra_pairwise.o src/mpi/coll/alltoall/.libs/lib_libmpi_la-alltoall_inter_pairwise_exchange.o src/mpi/coll/alltoallv/.libs/lib_libmpi_la-alltoallv_allcomm_nb.o src/mpi/coll/alltoallv/.libs/lib_libmpi_la-alltoallv_intra_pairwise_sendrecv_replace.o src/mpi/coll/alltoallv/.libs/lib_libmpi_la-alltoallv_intra_scattered.o src/mpi/coll/alltoallv/.libs/lib_libmpi_la-alltoallv_inter_pairwise_exchange.o src/mpi/coll/alltoallw/.libs/lib_libmpi_la-alltoallw_allcomm_nb.o src/mpi/coll/alltoallw/.libs/lib_libmpi_la-alltoallw_intra_pairwise_sendrecv_replace.o src/mpi/coll/alltoallw/.libs/lib_libmpi_la-alltoallw_intra_scattered.o src/mpi/coll/alltoallw/.libs/lib_libmpi_la-alltoallw_inter_pairwise_exchange.o src/mpi/coll/barrier/.libs/lib_libmpi_la-barrier_allcomm_nb.o src/mpi/coll/barrier/.libs/lib_libmpi_la-barrier_intra_dissemination.o src/mpi/coll/barrier/.libs/lib_libmpi_la-barrier_intra_smp.o src/mpi/coll/barrier/.libs/lib_libmpi_la-barrier_inter_bcast.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_utils.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_allcomm_nb.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_intra_binomial.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_intra_scatter_recursive_doubling_allgather.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_intra_scatter_ring_allgather.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_intra_smp.o src/mpi/coll/bcast/.libs/lib_libmpi_la-bcast_inter_remote_send_local_bcast.o src/mpi/coll/exscan/.libs/lib_libmpi_la-exscan_allcomm_nb.o src/mpi/coll/exscan/.libs/lib_libmpi_la-exscan_intra_recursive_doubling.o src/mpi/coll/gather/.libs/lib_libmpi_la-gather_allcomm_nb.o src/mpi/coll/gather/.libs/lib_libmpi_la-gather_intra_binomial.o src/mpi/coll/gather/.libs/lib_libmpi_la-gather_inter_linear.o src/mpi/coll/gather/.libs/lib_libmpi_la-gather_inter_local_gather_remote_send.o src/mpi/coll/gatherv/.libs/lib_libmpi_la-gatherv_allcomm_nb.o src/mpi/coll/gatherv/.libs/lib_libmpi_la-gatherv_allcomm_linear.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_allcomm_nb.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_intra_recursive_halving.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_intra_pairwise.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_intra_recursive_doubling.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_intra_noncommutative.o src/mpi/coll/reduce_scatter/.libs/lib_libmpi_la-reduce_scatter_inter_remote_reduce_local_scatter.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_allcomm_nb.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_intra_recursive_halving.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_intra_pairwise.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_intra_recursive_doubling.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_intra_noncommutative.o src/mpi/coll/reduce_scatter_block/.libs/lib_libmpi_la-reduce_scatter_block_inter_remote_reduce_local_scatter.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce_allcomm_nb.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce_intra_binomial.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce_intra_reduce_scatter_gather.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce_intra_smp.o src/mpi/coll/reduce/.libs/lib_libmpi_la-reduce_inter_local_reduce_remote_send.o src/mpi/coll/scan/.libs/lib_libmpi_la-scan_allcomm_nb.o src/mpi/coll/scan/.libs/lib_libmpi_la-scan_intra_recursive_doubling.o src/mpi/coll/scan/.libs/lib_libmpi_la-scan_intra_smp.o src/mpi/coll/scatter/.libs/lib_libmpi_la-scatter_allcomm_nb.o src/mpi/coll/scatter/.libs/lib_libmpi_la-scatter_intra_binomial.o src/mpi/coll/scatter/.libs/lib_libmpi_la-scatter_inter_linear.o src/mpi/coll/scatter/.libs/lib_libmpi_la-scatter_inter_remote_send_local_scatter.o src/mpi/coll/scatterv/.libs/lib_libmpi_la-scatterv_allcomm_nb.o src/mpi/coll/scatterv/.libs/lib_libmpi_la-scatterv_allcomm_linear.o src/mpi/coll/neighbor_allgather/.libs/lib_libmpi_la-neighbor_allgather_allcomm_nb.o src/mpi/coll/neighbor_allgatherv/.libs/lib_libmpi_la-neighbor_allgatherv_allcomm_nb.o src/mpi/coll/neighbor_alltoall/.libs/lib_libmpi_la-neighbor_alltoall_allcomm_nb.o src/mpi/coll/neighbor_alltoallv/.libs/lib_libmpi_la-neighbor_alltoallv_allcomm_nb.o src/mpi/coll/neighbor_alltoallw/.libs/lib_libmpi_la-neighbor_alltoallw_allcomm_nb.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_recursive_doubling.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_brucks.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_ring.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_inter_local_gather_remote_bcast.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_gentran_algos.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_recexch_distance_doubling.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_recexch_distance_halving.o src/mpi/coll/iallgather/.libs/lib_libmpi_la-iallgather_intra_gentran_brucks.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_recursive_doubling.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_brucks.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_ring.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_inter_remote_gather_local_bcast.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_gentran_algos.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_recexch_distance_doubling.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_recexch_distance_halving.o src/mpi/coll/iallgatherv/.libs/lib_libmpi_la-iallgatherv_intra_gentran_ring.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_naive.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_reduce_scatter_allgather.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_recursive_doubling.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_smp.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_inter_remote_reduce_local_bcast.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_gentran_algos.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_recexch_single_buffer.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_recexch_multiple_buffer.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_tree_kary.o src/mpi/coll/iallreduce/.libs/lib_libmpi_la-iallreduce_intra_tree_knomial.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall_intra_inplace.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall_intra_brucks.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall_intra_permuted_sendrecv.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall_intra_pairwise.o src/mpi/coll/ialltoall/.libs/lib_libmpi_la-ialltoall_inter_pairwise_exchange.o src/mpi/coll/ialltoallv/.libs/lib_libmpi_la-ialltoallv_intra_inplace.o src/mpi/coll/ialltoallv/.libs/lib_libmpi_la-ialltoallv_intra_blocked.o src/mpi/coll/ialltoallv/.libs/lib_libmpi_la-ialltoallv_inter_pairwise_exchange.o src/mpi/coll/ialltoallw/.libs/lib_libmpi_la-ialltoallw_intra_inplace.o src/mpi/coll/ialltoallw/.libs/lib_libmpi_la-ialltoallw_intra_blocked.o src/mpi/coll/ialltoallw/.libs/lib_libmpi_la-ialltoallw_inter_pairwise_exchange.o src/mpi/coll/ibarrier/.libs/lib_libmpi_la-ibarrier_intra_recursive_doubling.o src/mpi/coll/ibarrier/.libs/lib_libmpi_la-ibarrier_inter_bcast.o src/mpi/coll/ibarrier/.libs/lib_libmpi_la-ibarrier_intra_recexch.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_binomial.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_scatter_ring_allgather.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_scatter_recursive_doubling_allgather.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_smp.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_inter_flat.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_gentran_algos.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_tree.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_scatter_recexch_allgather.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_intra_ring.o src/mpi/coll/ibcast/.libs/lib_libmpi_la-ibcast_utils.o src/mpi/coll/iexscan/.libs/lib_libmpi_la-iexscan_intra_recursive_doubling.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather_intra_binomial.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather_inter_short.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather_inter_long.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather_gentran_algos.o src/mpi/coll/igather/.libs/lib_libmpi_la-igather_intra_tree.o src/mpi/coll/igatherv/.libs/lib_libmpi_la-igatherv_allcomm_linear.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_intra_recursive_halving.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_intra_pairwise.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_intra_recursive_doubling.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_intra_noncommutative.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_inter_remote_reduce_local_scatterv.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_gentran_algos.o src/mpi/coll/ireduce_scatter/.libs/lib_libmpi_la-ireduce_scatter_intra_recexch.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_intra_recursive_halving.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_intra_pairwise.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_intra_recursive_doubling.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_intra_noncommutative.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_inter_remote_reduce_local_scatterv.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_gentran_algos.o src/mpi/coll/ireduce_scatter_block/.libs/lib_libmpi_la-ireduce_scatter_block_intra_recexch.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_intra_binomial.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_intra_reduce_scatter_gather.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_intra_smp.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_inter_local_reduce_remote_send.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_gentran_algos.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_intra_tree.o src/mpi/coll/ireduce/.libs/lib_libmpi_la-ireduce_intra_ring.o src/mpi/coll/iscan/.libs/lib_libmpi_la-iscan_intra_recursive_doubling.o src/mpi/coll/iscan/.libs/lib_libmpi_la-iscan_intra_smp.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter_intra_binomial.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter_inter_linear.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter_inter_remote_send_local_scatter.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter_gentran_algos.o src/mpi/coll/iscatter/.libs/lib_libmpi_la-iscatter_intra_tree.o src/mpi/coll/iscatterv/.libs/lib_libmpi_la-iscatterv_allcomm_linear.o src/mpi/coll/ineighbor_allgather/.libs/lib_libmpi_la-ineighbor_allgather_allcomm_linear.o src/mpi/coll/ineighbor_allgatherv/.libs/lib_libmpi_la-ineighbor_allgatherv_allcomm_linear.o src/mpi/coll/ineighbor_alltoall/.libs/lib_libmpi_la-ineighbor_alltoall_allcomm_linear.o src/mpi/coll/ineighbor_alltoallv/.libs/lib_libmpi_la-ineighbor_alltoallv_allcomm_linear.o src/mpi/coll/ineighbor_alltoallw/.libs/lib_libmpi_la-ineighbor_alltoallw_allcomm_linear.o src/mpi/coll/op/.libs/lib_libmpi_la-opsum.o src/mpi/coll/op/.libs/lib_libmpi_la-opmax.o src/mpi/coll/op/.libs/lib_libmpi_la-opmin.o src/mpi/coll/op/.libs/lib_libmpi_la-opband.o src/mpi/coll/op/.libs/lib_libmpi_la-opbor.o src/mpi/coll/op/.libs/lib_libmpi_la-opbxor.o src/mpi/coll/op/.libs/lib_libmpi_la-opland.o src/mpi/coll/op/.libs/lib_libmpi_la-oplor.o src/mpi/coll/op/.libs/lib_libmpi_la-oplxor.o src/mpi/coll/op/.libs/lib_libmpi_la-opprod.o src/mpi/coll/op/.libs/lib_libmpi_la-opminloc.o src/mpi/coll/op/.libs/lib_libmpi_la-opmaxloc.o src/mpi/coll/op/.libs/lib_libmpi_la-opno_op.o src/mpi/coll/op/.libs/lib_libmpi_la-opreplace.o src/mpi/coll/allreduce_group/.libs/lib_libmpi_la-allreduce_group.o src/mpi/coll/src/.libs/lib_libmpi_la-coll_impl.o src/mpi/coll/transports/gentran/.libs/lib_libmpi_la-gentran_impl.o src/mpi/coll/transports/gentran/.libs/lib_libmpi_la-gentran_utils.o src/mpi/coll/transports/gentran/.libs/lib_libmpi_la-tsp_gentran.o src/mpi/coll/transports/stubtran/.libs/lib_libmpi_la-stubtran_impl.o src/mpi/coll/transports/stubtran/.libs/lib_libmpi_la-tsp_stubtran.o src/mpi/coll/algorithms/treealgo/.libs/lib_libmpi_la-treealgo.o src/mpi/coll/algorithms/treealgo/.libs/lib_libmpi_la-treeutil.o src/mpi/coll/algorithms/recexchalgo/.libs/lib_libmpi_la-recexchalgo.o src/mpi/coll/algorithms/stubalgo/.libs/lib_libmpi_la-stubalgo.o src/mpi/coll/.libs/lib_libmpi_la-helper_fns.o src/mpi/coll/.libs/lib_libmpi_la-nbcutil.o src/mpi/comm/.libs/lib_libmpi_la-commutil.o src/mpi/comm/.libs/lib_libmpi_la-contextid.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-darray_support.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_blockindexed.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_contig.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_indexed.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_pairtype.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_struct.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-dataloop_create_vector.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-segment.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-segment_count.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-segment_flatten.o src/mpi/datatype/dataloop/.libs/lib_libmpi_la-subarray_support.o src/mpi/datatype/.libs/lib_libmpi_la-typeutil.o src/mpi/datatype/.libs/lib_libmpi_la-ext32_datatype.o src/mpi/datatype/.libs/lib_libmpi_la-looputil.o src/mpi/datatype/.libs/lib_libmpi_la-type_blockindexed.o src/mpi/datatype/.libs/lib_libmpi_la-type_create_pairtype.o src/mpi/datatype/.libs/lib_libmpi_la-type_debug.o src/mpi/datatype/.libs/lib_libmpi_la-type_flatten.o src/mpi/errhan/.libs/lib_libmpi_la-errutil.o src/mpi/errhan/.libs/lib_libmpi_la-dynerrutil.o src/mpi/group/.libs/lib_libmpi_la-grouputil.o src/mpi/info/.libs/lib_libmpi_la-infoutil.o src/mpi/init/.libs/lib_libmpi_la-initinfo.o src/mpi/init/.libs/lib_libmpi_la-async.o src/mpi/init/.libs/lib_libmpi_la-netloc_util.o src/mpi/pt2pt/.libs/lib_libmpi_la-bsendutil.o src/mpi/request/.libs/lib_libmpi_la-mpir_request.o src/mpi/rma/.libs/lib_libmpi_la-winutil.o src/mpi/rma/.libs/lib_libmpi_la-rmatypeutil.o src/mpi/topo/.libs/lib_libmpi_la-topoutil.o src/util/mem/.libs/lib_libmpi_la-handlemem.o src/util/mem/.libs/lib_libmpi_la-strerror.o src/util/cvar/.libs/lib_libmpi_la-mpir_cvars.o src/util/procmap/.libs/lib_libmpi_la-local_proc.o src/util/assert/.libs/lib_libmpi_la-assert.o src/binding/fortran/mpif_h/.libs/lib_libmpi_la-fdebug.o src/binding/fortran/mpif_h/.libs/lib_libmpi_la-setbot.o src/binding/fortran/mpif_h/.libs/setbotf.o src/binding/fortran/use_mpi/.libs/lib_libmpi_la-create_f90_util.o src/glue/romio/.libs/lib_libmpi_la-glue_romio.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_buffer.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_comm.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_comm_spawn_multiple.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_connection.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_recv_pkt.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_recv_req.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_revoke_pkt.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_send_req.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_handle_op_req.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_port.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_recvq.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_request.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rma_progress.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rma_ops.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rma_reqops.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rma_sync.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rma_pkthandler.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_rndv.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_eager.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_eagersync.o src/mpid/ch3/src/.libs/lib_libmpi_la-ch3u_win_fns.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_abort.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_cancel_recv.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_cancel_send.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_comm_disconnect.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_comm_spawn_multiple.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_comm_failure_ack.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_comm_get_all_failed_procs.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_comm_revoke.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_finalize.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_get_universe_size.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_getpname.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_improbe.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_imrecv.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_init.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_iprobe.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_irecv.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_irsend.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_isend.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_issend.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_mprobe.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_mrecv.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_port.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_probe.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_recv.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_rsend.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_send.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_ssend.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_startall.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_vc.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_rma.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpidi_rma.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpid_aint.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpidi_isend_self.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpidi_pg.o src/mpid/ch3/src/.libs/lib_libmpi_la-mpidi_printf.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_finalize.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_init.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_isend.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_isendv.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_istartmsg.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_istartmsgv.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_progress.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_rma_shm.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3_win_fns.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3i_comm.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-ch3i_eagernoncontig.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_init.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_mpich.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_ckpt.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_finalize.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_network_poll.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_network.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_debug.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_lmt.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_lmt_shm.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_net_array.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_lmt_dma.o src/mpid/ch3/channels/nemesis/src/.libs/lib_libmpi_la-mpid_nem_lmt_vmsplice.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_finalize.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_init.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_send.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_utility.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-socksm.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_getip.o src/mpid/ch3/channels/nemesis/netmod/tcp/.libs/lib_libmpi_la-tcp_ckpt.o src/mpid/ch3/channels/nemesis/netmod/none/.libs/lib_libmpi_la-none.o src/mpid/ch3/channels/nemesis/utils/monitor/.libs/lib_libmpi_la-papi_defs.o src/mpid/ch3/channels/nemesis/utils/replacements/.libs/lib_libmpi_la-mkstemp.o src/mpid/common/sched/.libs/lib_libmpi_la-mpidu_sched.o src/mpid/common/shm/.libs/lib_libmpi_la-mpidu_shm_alloc.o src/mpid/common/shm/.libs/lib_libmpi_la-mpidu_shm_barrier.o src/mpi_t/.libs/lib_libmpi_la-mpit.o src/nameserv/pmi/.libs/lib_libmpi_la-pmi_nameserv.o src/pmi/simple/.libs/lib_libmpi_la-simple_pmiutil.o src/pmi/simple/.libs/lib_libmpi_la-simple_pmi.o   --whole-archive src/openpa/src/.libs/libopa.a src/mpl/.libs/libmpl.a /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b/src/hwloc/hwloc/.libs/libhwloc_embedded.a src/mpi/romio/.libs/libromio.a --no-whole-archive  -lm -L/usr/local/lib -lxml2 -lpthread  -O2   -soname libmpi.so.0 -o lib/.libs/libmpi.so.0.0.0
clang-6.0: error: unsupported option '--whole-archive'
clang-6.0: error: unsupported option '--no-whole-archive'
clang-6.0: error: unknown argument: '-soname'
clang-6.0: error: no such file or directory: 'libmpi.so.0'
*** Error code 1

Stop.
make[2]: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b
*** Error code 1

Stop.
make: stopped in /wrkdirs/usr/ports/net/mpich2/work/mpich-fa1506d9818ff90cd34d722d13c7c31af64cfb4b

[jeffhammond]

@teamblubee --enable-static --disable-shared is a workaround. FreeBSD may not like it but it works.

[naromero77]

I see the same error with the Spack package manager when building mpich using clang+flang compilers. Strangely, the mpich Spack package manager does not support a static library only installl, thus Jeff's work around won't work without editing the mpich Spack package (doable but basically a workaround for the real problem).

[jeffhammond]

@tgamblin is lack of static-only builds a bug or a feature in @spack?

[tgamblin]

I wouldn’t say it’s either. We don’t actively prevent people from doing static builds, but it’s work to make most packages do them. So if someone wants to add a variant to enable mpich to build static, that would be fine. But we haven’t made a major push to make everything support that yet.

[naromero77]

Its just a matter of a variant of the package supporting that configuration option. But this is handled on a per package basis.

[naromero77]

I don't know all the details because I just found this issue by Googling it, but I think the right thing to do is to fix configure/automake in MPICH to properly detect clang/flag combination. I just tried building OpenMPI with clang/flang in Spack and I had no trouble at all. This is just under Ubuntu Linux.

[raffenet]

@naromero77 agreed. We need to fix our flang support in MPICH.

[teamblubee]

I have a makefile workaround that I apply after doing autogen.sh but before actually calling configure.

    @(sed -E                                                                    \
        -e "/lt_prog_compiler_wl_(F77|FC)=\$$/s/=/='-Wl,'/"     \
        -e "/lt_prog_compiler_pic_(F77|FC)=\$$/s/=/='-fPIC'/"       \
        -e "/lt_prog_compiler_static_(F77|FC)=\$$/s/=/='-static'/"  \
        -e "/lt_prog_compiler_can_build_shared_(F77|FC)=no\$$/d"    \
        ${WRKSRC}/configure ${WRKSRC}/src/mpi/romio/configure)
    @(cd ${WRKSRC} && ./configure --prefix=${PREFIX} --enable-static=no CC=clang FC=flang)

I'd like to generalize this a bit and create a libtool patch, something similar to the macosx patch that's bundled with MPICH2.

[raffenet]

@naromero77 were you able to install Flang from Spack? I have been unsuccessful on every machine/compiler combination I tried.

[raffenet]

@teamblubee yes, this sounds like the right thing to do absent an upstream fix in libtool.

[naromero77]

@raffenet I do remember installing Spack with flang was very difficult. Let me find my notes and get back to you soon.

[naromero77]

@raffenet Looks like a got flang installed, but I remember having to report an issue to the flang developers. Earlier version will not install.

parallels-vm:~> spack find llvm
==> 5 installed packages.
-- linux-ubuntu18.04-x86_64 / clang@6.0.0-1ubuntu2 --------------
llvm@flang-20180612  llvm@flang-develop

-- linux-ubuntu18.04-x86_64 / gcc@7.3.0 -------------------------
llvm@flang-20180612  llvm@flang-20180612  llvm@flang-develop

[teamblubee]

I just successfully compiled mpich2 on FreeBSD using Flang compiler

I applied 3 patches, I hope it's okay to add them here as code segments, would it be possible to apply these changes?

This is the major patch that allows Flang to properly link the program

Index: Mk/Uses/libtool.mk
===================================================================
--- Mk/Uses/libtool.mk  (revision 480649)
+++ Mk/Uses/libtool.mk  (working copy)
@@ -32,6 +32,9 @@ patch-libtool:
        -e '/dragonfly\*/!s/^ *freebsd\*[ )]/dragonfly* | &/'   \
        -e '/gcc_dir=\\`/s/gcc /$$CC /'             \
        -e '/gcc_ver=\\`/s/gcc /$$CC /'             \
+       -e '/PORTME.*linker flags/,/can_build_shared/ {     \
+           /freebsd\*/!s/linux\*/dragonfly* | freebsd* | &/;   \
+           /flang\*/!s/ifort\*/& | flang*/; }'         \
        -e '/link_all_deplibs[0-9A-Z_]*=/s/=unknown/=no/'   \
        -e '/archive_expsym_cmds[0-9A-Z_]*=.$$CC.*-retain-/ {   \
            s/-retain-symbols-file/-version-script/;        \

These are just simpler

--- confdb/config.rpath.orig    2018-09-17 16:17:54 UTC
+++ confdb/config.rpath
@@ -80,7 +80,7 @@ else
         nagfor*)
           wl='-Wl,-Wl,,'
           ;;
-        pgcc* | pgf77* | pgf90* | pgf95* | pgfortran*)
+        pgcc* | pgf77* | pgf90* | pgf95* | pgfortran*, | flang* )
           wl='-Wl,'
           ;;
         ccc*)

--- confdb/aclocal_fc.m4.orig   2018-09-17 16:18:05 UTC
+++ confdb/aclocal_fc.m4
@@ -2,7 +2,7 @@ dnl PAC_FC_SEARCH_LIST - expands to a whitespace separ
 dnl fortran compilers for use with AC_PROG_FC that is more suitable for HPC
 dnl software packages
 AC_DEFUN([PAC_FC_SEARCH_LIST],
-         [ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 gfortran f90 epcf90 f95 fort lf95 g95 ifc efc gfc])
+         [flang ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 gfortran f90 epcf90 f95 fort lf95 g95 ifc efc gfc])
 dnl /*D
 dnl PAC_PROG_FC([COMPILERS])
 dnl

--- confdb/aclocal_f77.m4.orig  2018-09-17 16:18:19 UTC
+++ confdb/aclocal_f77.m4
@@ -1,7 +1,7 @@
 dnl PAC_F77_SEARCH_LIST - expands to a whitespace separated list of fortran 77
 dnl compilers for use with AC_PROG_F77 that is more suitable for HPC software
 dnl packages
-AC_DEFUN([PAC_F77_SEARCH_LIST],[ifort pgf77 af77 xlf frt cf77 fort77 fl32 fort ifc efc ftn gfortran f77 g77])
+AC_DEFUN([PAC_F77_SEARCH_LIST],[flang ifort pgf77 af77 xlf frt cf77 fort77 fl32 fort ifc efc ftn gfortran f77 g77])
 dnl PAC_PROG_F77 - reprioritize the F77 compiler search order
 dnl NOTE: this macro suffers from a basically intractable "expanded before it
 dnl was required" problem when libtool is also used