TESTS: "repeatability" tests

pneuvial / c3co

Inferring cancer cell clonality from copy-number data

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TESTS: "repeatability" tests #38

Closed HenrikBengtsson closed 5 years ago

HenrikBengtsson commented 6 years ago

The package could need so "repeatability" tests, that is, tests that make sure results don't change between updates/versions as long as the input and methods are the same. The current set of tests are focused on making sure output is of proper data type and dimensions.

This will make it safe to optimize code, introduce parallelism (#37) etc. Right now we don't know if a small tweak breaks the results.

HenrikBengtsson commented 5 years ago

TASKS:

[ ] Unit tests for get.W(), get.Z(), and positiveFusedLasso() (Issue #42)
[x] ~~Unit tests for initializeZ() (Issue #42) ~~ Decided not needed.
[ ] Unit tests for fitC3co()

HenrikBengtsson commented 5 years ago

Closing - this is covered by individual issues.