Closed tashrifbillah closed 5 years ago
If all cases are copied to one directory and dti
directory is same for all cases, the above happens.
Ideally, each case should have its own folder, the problem won't happen.
When you want to --debug under the above condition, reference diffusion measures are no longer there and so --debug fails.
Prompt the user to have separate directories for each case or NOT use --debug.
Add a note in README.md
https://github.com/pnlbwh/dMRIharmonization/blob/spm-bspline/lib/harmonization.py#L268
The above checking is there to let a user harmonize data multiple times without having to remove previous results manually.
Make a note about
--force
in general.