pnlbwh / pnlNipype

PNL pipeline for NIFTI images
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command not found while working through tutorial #100

Closed RyanZurrin closed 1 year ago

RyanZurrin commented 1 year ago

While working through the tutorial-PNL, and in the section White Matter Analysis, it says to make sure you are in your dwi directory and enter:

wm_quality_control_tractography Tractography/ tractQC/

which then just causes an error.

(pnlpipe3) [rez3@pnl-oracle dwi]$ wm_quality_control_tractography Tractography/ tractQC/ bash: wm_quality_control_tractography: command not found...

tashrifbillah commented 1 year ago

wm_quality_control_tractography.py