Singularity bootstrap around docker

pnlbwh / pnlpipe-containers

Containers for pnlpipe software

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Singularity bootstrap around docker #6

Closed tashrifbillah closed 2 years ago

tashrifbillah commented 3 years ago

You may also build the container bootstrapping around our docker container. But then you would have to source the environment every time you use the container:

export SINGULARITY_TMPDIR=$HOME
singularity build pnlpipe.sif docker://tbillah/pnlpipe:latest
singularity shell pnlpipe.sif

singularity> source /home/pnlbwh/.bashrc

tashrifbillah commented 2 years ago

Closed by https://github.com/pnlbwh/pnlpipe-containers/wiki/Singularity-container-from-Docker-container but mistakenly referenced issue #5.