mf must be transposed after reading

[tashrifbillah]

The Nrrd structure stores the measurement frame vector[i] as row[i] in its measurementFrame array So it must be transposed before applying to gradients Note that gradients_ras = measurement_frame * gradients_xyz Other than transposing later, read as (i,j)<--[j][i] in one step

Fixes #134

[tashrifbillah]

The only, yet phenomenal, change is:

measurement_frame(i, j) = _data_nrrd->measurementFrame[j][i]

which used to be [i][j] on the right.

Thank you @yrathi .

[tashrifbillah]

Rebuild required in--

• [x] /rfanfs/
• [x] /data/pnl/
  • [x] CentOS 6
  • [x] CentOS 7
• [ ] pnlpipe containers--docker and singularity
  • [ ] deployment in JDC HPC
  • [ ] docker
  • [ ] singularity
• [x] pnlpipe_software
  • [x] pnlpipe re-index
  • [x] pnlNipype re-index