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pnlbwh / ukftractography

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FreeWater in help message #144

Open tashrifbillah opened 2 years ago

tashrifbillah commented 2 years ago

https://github.com/pnlbwh/ukftractography/blob/2c859b318ab3125c54750045a5e3877fcd50139d/ukf/cli.cc#L100-L103

    --recordFreeWater
     Record output from tensor plus free water model: Save the fraction of
     free water. Attaches field 'FreeWater' to fiber. (value: 0)

   --freeWater
     Adds a term for free water diffusion to the model. The free water
     model is a tensor with all 3 eigenvalues equal to the diffusivity of
     free water (0.003). To output the free water fraction, make sure to
     use the 'save free water' parameter. (value: 0)