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pnlbwh / ukftractography

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No rule to make target `/usr/lib64/libwrap.so', needed by ConvertVTK #46

Closed pnlbwh closed 7 years ago

pnlbwh commented 9 years ago

Hi guys @Chaircrusher @hjmjohnson @reckbo ,

I've been trying to compile UKFTractography (stand alone) on our collaborator's machines at U Penn.

It goes well for all the external source builds, until it hits the build of UKFtractography, where it gives the following error:

[ 95%] Performing build step for 'UKFTractography' Scanning dependencies of target UKFCommonLib [ 3%] Building CXX object common/CMakeFiles/UKFCommonLib.dir/dummy.cc.o Linking CXX static library /cbica/home/savadjip/software/ukftractography-build/lib/libUKFCommonLib.a [ 3%] Built target UKFCommonLib [ 6%] Generating ConvertVTKCLP.h GenerateCLP --InputXML /cbica/home/savadjip/software/ukftractography/ukf/ConvertVTK.xml --OutputCxx /cbica/home/savadjip/software/ukftractography-build/UKFTractography-build/ukf/ConvertVTKCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 4 parameters Scanning dependencies of target ConvertVTKLib [ 9%] Building CXX object ukf/CMakeFiles/ConvertVTKLib.dir/ConvertVTK.cxx.o Linking CXX static library /cbica/home/savadjip/software/ukftractography-build/lib/libConvertVTKLib.a [ 9%] Built target ConvertVTKLib Scanning dependencies of target ConvertVTK [ 12%] Building CXX object ukf/CMakeFiles/ConvertVTK.dir/cbica/home/savadjip/software/ukftractography-build/src/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o make[5]: * No rule to make target /usr/lib64/libwrap.so', needed by/cbica/home/savadjip/software/ukftractography-build/bin/ConvertVTK'. Stop. make[4]: * [ukf/CMakeFiles/ConvertVTK.dir/all] Error 2 make[3]: * [all] Error 2 make[2]: * [UKFTractography-prefix/src/UKFTractography-stamp/UKFTractography-build] Error 2 make[1]: * [CMakeFiles/UKFTractography.dir/all] Error 2 make: * [all] Error 2

Are you guys aware of what this target library '/usr/lib64/libwrap.so' is? Even if it did have the rule to build it, I actually don't have permissions to write under /usr/lib64/ , so to me it feels like a bad idea to have a target directly in /usr/lib64/ ...

As the error seems to occur during the compilation of SEMCommandLineLibraryWrapper.cxx , could this recent commit be related to this error? https://github.com/pnlbwh/ukftractography/commit/368e301c480c13bc98300c4f576e8514545f3e4e

Any advice/help is much appreciated, thanks!

Peter

pnlbwh commented 9 years ago

So to follow up on my hypothesis that the error was caused by the latest commits from this January, I did a git reset --hard 983fbb0 which is the latest commit from October before the latest changes to SEMMacroBuild and VTK_Components, and the build worked fine without any errors.

Cheers, Peter

ihnorton commented 7 years ago

Not sure who this was from, but external source builds should work now with recent cmake fixes.

Chaircrusher commented 7 years ago

You can take me off this project, I no longer work on VTK/ITK stuff....